RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 LAS2Q8IYD9 372 aa12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 MUC15Q8N387 334 aa12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 RNF175Q8N4F7 328 aa12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 SNX31Q8N9S9 440 aa12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 TMBIM1Q969X1 311 aa12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 SLC35A4Q96G79 324 aa12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 SIGLEC10Q96LC7 697 aa12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 DHRS9Q9BPW9 319 aa12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 ZNF717Q9BY31 904 aaPredicted RBP12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 LYARQ9NX58 379 aaKnown RBP12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 CFL2Q9Y281 166 aa12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 REXO2Q9Y3B8 237 aaKnown RBP12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 GOLGA8QA0A0J9YX86 632 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 GOLGA8OA6NCC3 632 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 NCF1BA6NI72 391 aaPredicted RBP12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 NCF1CA8MVU1 366 aaPredicted RBP12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 GOLGA8NF8WBI6 632 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 GOLGA8RI6L899 631 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 NDUFS8O00217 210 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 ABCD4O14678 606 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 PGRMC2O15173 223 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 TO15178 435 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 EEDO75530 441 aaKnown RBP12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 REM1O75628 298 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 PCNAP12004 261 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 NCF1P14598 390 aaPredicted RBP12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 NT5EP21589 574 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 PIK3R1P27986 724 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 AGTR1P30556 359 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 GGT5P36269 586 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 MAGEA3P43357 314 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 EIF1AXP47813 144 aaKnown RBP12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 KCNJ1P48048 391 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 PDLIM4P50479 330 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 RAP1GDS1P52306 607 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 IRF8Q02556 426 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 CHIT1Q13231 466 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 E2F2Q14209 437 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 EXOSC7Q15024 291 aaKnown RBP12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 TBCCQ15814 346 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 AWAT1Q58HT5 328 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 FBXO48Q5FWF7 155 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 OR52E8Q6IFG1 317 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 FRA10AC1Q70Z53 315 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 ADAMTSL2Q86TH1 951 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 EXOC3L1Q86VI1 746 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 CNTN4Q8IWV2 1026 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 SYCE1Q8N0S2 351 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 FBXL14Q8N1E6 418 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 ADCY4Q8NFM4 1077 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 OR2M3Q8NG83 312 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 OR7G3Q8NG95 312 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 ESAMQ96AP7 390 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 USB1Q9BQ65 265 aaKnown RBP12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 PIMREGQ9BSJ6 248 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 WDR41Q9HAD4 459 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 ZBTB26Q9HCK0 441 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 XAB2Q9HCS7 855 aaKnown RBP12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 PRM3Q9NNZ6 103 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 GLRX2Q9NS18 164 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 AP4B1Q9Y6B7 739 aa12.29□□□□□ -0.44
NKX3-1-202ENST00000523261 WNK1Q9H4A3 2382 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 A0A0A6YYD5 115 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 ESYT3A0FGR9 886 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 GOLGA8MH3BSY2 632 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 SMAD9O15198 467 aaKnown RBP12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 TUBBP07437 444 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 FAM58BPP0C7Q3 252 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 ZNF23P17027 643 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 DRD5P21918 477 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 PPICP45877 212 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 MGAT2Q10469 447 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 CRYMQ14894 314 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 SLMAPQ14BN4 828 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 TGFBIQ15582 683 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 TRIP13Q15645 432 aaPredicted RBP12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 PDK4Q16654 411 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 C6orf163Q5TEZ5 329 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 FAM45BPQ6NSW5 357 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 CAVIN1Q6NZI2 390 aaKnown RBP12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 FAM111BQ6SJ93 734 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 TFAP2EQ6VUC0 442 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 DEF8Q6ZN54 512 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 GALNT7Q86SF2 657 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 OR52B6Q8NGF0 335 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 FAM45AQ8TCE6 357 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 KISS1RQ969F8 398 aaPredicted RBP12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 NXNL1Q96CM4 212 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 GBP4Q96PP9 640 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 ADOQ96SZ5 270 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 DDX47Q9H0S4 455 aaKnown RBP12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 NPAP1Q9NZP6 1156 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 SLC17A6Q9P2U8 582 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 BCAP29Q9UHQ4 241 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 ZNF639Q9UID6 485 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 PCDHGB1Q9Y5G3 927 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 EPN1Q9Y6I3 576 aaPredicted RBP12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 ARFGEF3Q5TH69 2177 aa12.28□□□□□ -0.44
NKX3-1-202ENST00000523261 EIF1AYO14602 144 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms