RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 GPR15P49685 360 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 CYP2J2P51589 502 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 LIMK2P53671 638 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 TMEM33P57088 247 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 PKIAP61925 76 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 PPP2CBP62714 309 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 PPP2CAP67775 309 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 RUNX3Q13761 415 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 SNTB1Q13884 538 aaKnown RBP7.1□□□□□ -1.27
HDAC3-216ENST00000523088 CHI3L2Q15782 390 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 GUCA2BQ16661 112 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 MPEG1Q2M385 716 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 ZNF699Q32M78 642 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 C14orf28Q4W4Y0 310 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 FBXW9Q5XUX1 488 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 REP15Q6BDI9 236 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 SPESP1Q6UW49 350 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 CLEC18BQ6UXF7 455 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 DLEU7Q6UYE1 221 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 C11orf57Q6ZUT1 292 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-216ENST00000523088 KCTD8Q6ZWB6 473 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 SPATA19Q7Z5L4 167 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 DHDDSQ86SQ9 333 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 KMT5CQ86Y97 462 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 UBQLNLQ8IYU4 475 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 DNAJC22Q8N4W6 341 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 ZNF283Q8N7M2 679 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 TC2NQ8N9U0 490 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 ABHD11Q8NFV4 315 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 OR2M7Q8NG81 312 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 OR56A3Q8NH54 315 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 C16orf78Q8WTQ4 265 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 TCTEX1D2Q8WW35 142 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 ADAMTS14Q8WXS8 1223 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 MYLPFQ96A32 169 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 ACDQ96AP0 544 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 PPWD1Q96BP3 646 aaKnown RBP7.1□□□□□ -1.27
HDAC3-216ENST00000523088 SMIM12Q96EX1 92 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 EEF2KMTQ96G04 330 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 ST6GAL2Q96JF0 529 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 CNBD2Q96M20 576 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 MAP3K3Q99759 626 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 AIF1LQ9BQI0 150 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 TRIM56Q9BRZ2 755 aaKnown RBP7.1□□□□□ -1.27
HDAC3-216ENST00000523088 NAT9Q9BTE0 207 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 SLC46A2Q9BY10 475 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 FGFBP2Q9BYJ0 223 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 BHLHE41Q9C0J9 482 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-216ENST00000523088 NXF2Q9GZY0 626 aaKnown RBP7.1□□□□□ -1.27
HDAC3-216ENST00000523088 ILKAPQ9H0C8 392 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-216ENST00000523088 SDCBP2Q9H190 292 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 HIPK2Q9H2X6 1198 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 LMAN1LQ9HAT1 526 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 IL1RAPQ9NPH3 570 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 GFOD1Q9NXC2 390 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 CNIH4Q9P003 139 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 MRPL15Q9P015 296 aaKnown RBP7.1□□□□□ -1.27
HDAC3-216ENST00000523088 PDP1Q9P0J1 537 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-216ENST00000523088 KLHL8Q9P2G9 620 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-216ENST00000523088 CORINQ9Y5Q5 1042 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 TEX264Q9Y6I9 313 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 R4GN57 208 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 MYO16Q9Y6X6 1858 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 KIAA1549LQ6ZVL6 1849 aa7.1□□□□□ -1.27
HDAC3-216ENST00000523088 ZNF292O60281 2723 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 A0A087WZY1 265 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 A0A1B0GV72 72 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 PRAMEF27A3QJZ7 478 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 HELTA6NFD8 242 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 PRAMEF25A6NGN4 478 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 OR6C76A6NM76 312 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 POC1B-GALNT4F8VUJ3 575 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 PRAMEF26H0Y7S4 382 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 H3BML4 177 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 BHLHE40O14503 412 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 SIGLEC5O15389 551 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 FLRT2O43155 660 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 PRAMEF4O60810 478 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 PRAMEF2O60811 474 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 PRAMEF11O60813 436 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 AKAP3O75969 853 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 LATS1O95835 1130 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 RLN2P04090 185 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 SHBGP04278 402 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 ANXA4P09525 319 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-216ENST00000523088 ELFN1P0C7U0 828 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 FOLR2P14207 255 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 CD72P21854 359 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 CYP2F1P24903 491 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 ELK4P28324 431 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 IL12BP29460 328 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 SPRP35270 261 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-216ENST00000523088 FASLGP48023 281 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 CDH8P55286 799 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 TXNL4AP83876 142 aaKnown RBP7.09□□□□□ -1.27
HDAC3-216ENST00000523088 CHRNB3Q05901 458 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 ZNF844Q08AG5 666 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 NFATC3Q12968 1075 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 ENPP2Q13822 863 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 CSHL1Q14406 222 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms