RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 NMRK1Q9NWW6 199 aa13.97□□□□□ -0.17
MRPS28-209ENST00000522987 SENP1Q9P0U3 644 aa13.97□□□□□ -0.17
MRPS28-209ENST00000522987 MCM8Q9UJA3 840 aa13.97□□□□□ -0.17
MRPS28-209ENST00000522987 VPS13CQ709C8 3753 aa13.97□□□□□ -0.17
MRPS28-209ENST00000522987 PRR14LQ5THK1 2151 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 A0A1W2PNV4 684 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 GOLGA8RI6L899 631 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 SEC14L5O43304 696 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 ZIC3O60481 467 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 KRT6AP02538 564 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 KRT6BP04259 564 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 COL6A2P12110 1019 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 ZNF708P17019 499 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 ADSLP30566 484 aaPredicted RBP13.96□□□□□ -0.17
MRPS28-209ENST00000522987 RFX3P48380 749 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 KRT6CP48668 564 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 NKX6-1P78426 367 aaPredicted RBP13.96□□□□□ -0.17
MRPS28-209ENST00000522987 LTBQ06643 244 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 C10orf62Q5T681 223 aaPredicted RBP13.96□□□□□ -0.17
MRPS28-209ENST00000522987 GPRIN3Q6ZVF9 776 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 METTL6Q8TCB7 284 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 SMPDL3BQ92485 455 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 FIG4Q92562 907 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 MTBPQ96DY7 904 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 SLC35A4Q96G79 324 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 ZC3HAV1LQ96H79 300 aaKnown RBP13.96□□□□□ -0.17
MRPS28-209ENST00000522987 C16orf45Q96MC5 204 aaPredicted RBP13.96□□□□□ -0.17
MRPS28-209ENST00000522987 VSTM2LQ96N03 204 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 BTBD9Q96Q07 612 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 FMO2Q99518 471 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 OPN3Q9H1Y3 402 aaPredicted RBP13.96□□□□□ -0.17
MRPS28-209ENST00000522987 MED11Q9P086 117 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 PPP4R1LQ9P1A2 415 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 PACSIN3Q9UKS6 424 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 OR10H1Q9Y4A9 318 aa13.96□□□□□ -0.17
MRPS28-209ENST00000522987 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 A8MXE2 369 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 SIAH2O43255 324 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 DLX3O60479 287 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 TNFSF13O75888 250 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 JUNP05412 331 aaKnown RBP13.95□□□□□ -0.18
MRPS28-209ENST00000522987 HOXC12P31275 282 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 DIO3P55073 304 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 B3GALT5-AS1P59052 145 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 TRA2BP62995 288 aaKnown RBP13.95□□□□□ -0.18
MRPS28-209ENST00000522987 ACSM2AQ08AH3 577 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 CSTF3Q12996 717 aaKnown RBP13.95□□□□□ -0.18
MRPS28-209ENST00000522987 RASA2Q15283 850 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 ZNF678Q5SXM1 525 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 RAET1LQ5VY80 246 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 ACSM2BQ68CK6 577 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 PPP4R4Q6NUP7 873 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 AAGABQ6PD74 315 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 CHMP1BQ7LBR1 199 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 ZNF550Q7Z398 422 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 FAM9CQ8IZT9 166 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 ZNF675Q8TD23 568 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 ZNF592Q92610 1267 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 PIK3IP1Q96FE7 263 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 DACH2Q96NX9 599 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 BBS4Q96RK4 519 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 PIGQQ9BRB3 760 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 FUT8Q9BYC5 575 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 RTN4RQ9BZR6 473 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 ZNF395Q9H8N7 513 aaPredicted RBP13.95□□□□□ -0.18
MRPS28-209ENST00000522987 SLC35C2Q9NQQ7 365 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 GIMAP4Q9NUV9 329 aa13.95□□□□□ -0.18
MRPS28-209ENST00000522987 EIF3LQ9Y262 564 aaKnown RBP13.95□□□□□ -0.18
MRPS28-209ENST00000522987 EXOC1LA0A1B0GW35 172 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 SHISA8B8ZZ34 492 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 H3BML4 177 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 ULK1O75385 1050 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 SNRPAP09012 282 aaKnown RBP13.94□□□□□ -0.18
MRPS28-209ENST00000522987 FOSL1P15407 271 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 HK1P19367 917 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 TAC1P20366 129 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 TIA1P31483 386 aaKnown RBP eCLIP13.94□□□□□ -0.18
MRPS28-209ENST00000522987 MC3RP41968 323 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 GAS1P54826 345 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 C2orf80Q0P641 193 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 EFR3AQ14156 821 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 SPDYAQ5MJ70 313 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 ANKRD34AQ69YU3 496 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 BTLAQ7Z6A9 289 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 PGM2Q96G03 612 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 C18orf12Q96KH6 178 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 ZFP3Q96NJ6 502 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 WFIKKN1Q96NZ8 548 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 ZNF382Q96SR6 550 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 C1QTNF3Q9BXJ4 246 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 PINK1Q9BXM7 581 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 PIGMQ9H3S5 423 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 UBTD1Q9HAC8 227 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 NDRG3Q9UGV2 375 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 TESMINQ9Y4I5 508 aa13.94□□□□□ -0.18
MRPS28-209ENST00000522987 RAI1Q7Z5J4 1906 aaPredicted RBP13.94□□□□□ -0.18
MRPS28-209ENST00000522987 A0A087WUV0 522 aaPredicted RBP13.93□□□□□ -0.18
MRPS28-209ENST00000522987 SLC22A20A6NK97 555 aa13.93□□□□□ -0.18
MRPS28-209ENST00000522987 SMAD7O15105 426 aaKnown RBP13.93□□□□□ -0.18
MRPS28-209ENST00000522987 ABCB7O75027 752 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms