RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-204	ENST00000521331	ACSS3	Q9H6R3	686 aa		13.46	□□□□□ -0.25
PRKDC-204	ENST00000521331	KLHL28	Q9NXS3	571 aa		13.46	□□□□□ -0.25
PRKDC-204	ENST00000521331	ELOVL5	Q9NYP7	299 aa		13.46	□□□□□ -0.25
PRKDC-204	ENST00000521331	TRPS1	Q9UHF7	1281 aa		13.46	□□□□□ -0.25
PRKDC-204	ENST00000521331	MCM8	Q9UJA3	840 aa		13.46	□□□□□ -0.25
PRKDC-204	ENST00000521331		H7C1Q1	480 aa		13.45	□□□□□ -0.26
PRKDC-204	ENST00000521331	INHBA	P08476	426 aa		13.45	□□□□□ -0.26
PRKDC-204	ENST00000521331	HSD3B1	P14060	373 aa		13.45	□□□□□ -0.26
PRKDC-204	ENST00000521331	POU2F1	P14859	743 aa		13.45	□□□□□ -0.26
PRKDC-204	ENST00000521331	HSD3B2	P26439	372 aa		13.45	□□□□□ -0.26
PRKDC-204	ENST00000521331	CORO7	P57737	925 aa		13.45	□□□□□ -0.26
PRKDC-204	ENST00000521331	B3GALT5-AS1	P59052	145 aa		13.45	□□□□□ -0.26
PRKDC-204	ENST00000521331	FGFBP1	Q14512	234 aa		13.45	□□□□□ -0.26
PRKDC-204	ENST00000521331	OR5M10	Q6IEU7	315 aa		13.45	□□□□□ -0.26
PRKDC-204	ENST00000521331	VWA1	Q6PCB0	445 aa		13.45	□□□□□ -0.26
PRKDC-204	ENST00000521331	C20orf204	Q6ZNR8	217 aa		13.45	□□□□□ -0.26
PRKDC-204	ENST00000521331	PIK3IP1	Q96FE7	263 aa		13.45	□□□□□ -0.26
PRKDC-204	ENST00000521331	PGM2	Q96G03	612 aa		13.45	□□□□□ -0.26
PRKDC-204	ENST00000521331		Q96MF0	132 aa		13.45	□□□□□ -0.26
PRKDC-204	ENST00000521331	C1QTNF3	Q9BXJ4	246 aa		13.45	□□□□□ -0.26
PRKDC-204	ENST00000521331	MRPL46	Q9H2W6	279 aa	Known RBP	13.45	□□□□□ -0.26
PRKDC-204	ENST00000521331	GIMAP4	Q9NUV9	329 aa		13.45	□□□□□ -0.26
PRKDC-204	ENST00000521331	HEY2	Q9UBP5	337 aa		13.45	□□□□□ -0.26
PRKDC-204	ENST00000521331	ARID1A	O14497	2285 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	HIVEP2	P31629	2446 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	TLN2	Q9Y4G6	2542 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	LINC01387	J3KSC0	135 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	PPP6C	O00743	305 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	SIAH2	O43255	324 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	PLOD3	O60568	738 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	KRT6A	P02538	564 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	KRT6B	P04259	564 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	TCEA1	P23193	301 aa	Known RBP	13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	UGT2B10	P36537	528 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	KRT6C	P48668	564 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	SERPINB9	P50453	376 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	GAS1	P54826	345 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	CDH13	P55290	713 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	CSTF3	Q12996	717 aa	Known RBP	13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	GANAB	Q14697	944 aa	Known RBP	13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	HEPACAM	Q14CZ8	416 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	NPSR1	Q6W5P4	371 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	RPS27L	Q71UM5	84 aa	Known RBP	13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	BTLA	Q7Z6A9	289 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	YTHDF3	Q7Z739	585 aa	Known RBP	13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	UBQLNL	Q8IYU4	475 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	FADS6	Q8N9I5	356 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	OR9A2	Q8NGT5	310 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	KAT2A	Q92830	837 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	ZNF845	Q96IR2	970 aa	Predicted RBP	13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	FUT8	Q9BYC5	575 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	SHCBP1L	Q9BZQ2	653 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	STMN4	Q9H169	189 aa	Predicted RBP	13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	ANKRA2	Q9H9E1	313 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	UBTD1	Q9HAC8	227 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	FOLH1B	Q9HBA9	442 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	ZDHHC18	Q9NUE0	388 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	TAS2R9	Q9NYW1	312 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	SENP1	Q9P0U3	644 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	PPP4R1L	Q9P1A2	415 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	PYCARD	Q9ULZ3	195 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	NFU1	Q9UMS0	254 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	ZNF175	Q9Y473	711 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	OR10H1	Q9Y4A9	318 aa		13.44	□□□□□ -0.26
PRKDC-204	ENST00000521331	ESYT3	A0FGR9	886 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	C16orf97	H3BN30	126 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	EMC8	O43402	210 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	TNFRSF21	O75509	655 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	IL3	P08700	152 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	CD8B	P10966	210 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	CASQ1	P31415	396 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	CCKAR	P32238	428 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	EVI2B	P34910	448 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	KIR2DL2	P43627	348 aa	Predicted RBP	13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	KCNJ5	P48544	419 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	RASA2	Q15283	850 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	RAET1L	Q5VY80	246 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	SLC44A2	Q8IWA5	706 aa	Predicted RBP	13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	FAM9C	Q8IZT9	166 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	CIART	Q8N365	385 aa	Predicted RBP	13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	CAVIN3	Q969G5	261 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	EXOSC8	Q96B26	276 aa	Known RBP	13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	EFHD2	Q96C19	240 aa	Predicted RBP	13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	MTBP	Q96DY7	904 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	HBEGF	Q99075	208 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	OPN3	Q9H1Y3	402 aa	Predicted RBP	13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	RNF122	Q9H9V4	155 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	SLC35C2	Q9NQQ7	365 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	SDHAF3	Q9NRP4	125 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	NINJ2	Q9NZG7	142 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	ZNF225	Q9UK10	706 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	ABCG2	Q9UNQ0	655 aa		13.43	□□□□□ -0.26
PRKDC-204	ENST00000521331	FBN3	Q75N90	2809 aa		13.42	□□□□□ -0.26
PRKDC-204	ENST00000521331	GNG14	A0A1W2PPG7	69 aa		13.42	□□□□□ -0.26
PRKDC-204	ENST00000521331		A8MT66	165 aa		13.42	□□□□□ -0.26
PRKDC-204	ENST00000521331	ESPN	B1AK53	854 aa		13.42	□□□□□ -0.26
PRKDC-204	ENST00000521331		B4DXG7	233 aa		13.42	□□□□□ -0.26
PRKDC-204	ENST00000521331	MANBA	O00462	879 aa		13.42	□□□□□ -0.26
PRKDC-204	ENST00000521331	PCDH7	O60245	1069 aa		13.42	□□□□□ -0.26

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