RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 LIMK2P53671 638 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 ARPP19P56211 112 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 SARNPP82979 210 aaKnown RBP3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 SMARCB1Q12824 385 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 TAF10Q12962 218 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 NAB1Q13506 487 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 KCNC3Q14003 757 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 ITIH4Q14624 930 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 CRYMQ14894 314 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 PSMD5Q16401 504 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 SLC25A53Q5H9E4 307 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 MS4A13Q5J8X5 152 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 ITPRIPL1Q6GPH6 555 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 SLC8B1Q6J4K2 584 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 RWDD4Q6NW29 188 aaKnown RBP3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 CASC4Q6P4E1 433 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 TMEM154Q6P9G4 183 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 RGS9BPQ6ZS82 235 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 CDHR3Q6ZTQ4 885 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 IKBIPQ70UQ0 350 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 CYS1Q717R9 158 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 BTN2A1Q7KYR7 527 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 DEFB128Q7Z7B8 93 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 LRRC6Q86X45 466 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 MCEMP1Q8IX19 187 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 CTAGE3PQ8IX95 158 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 ATPAF2Q8N5M1 289 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 ATP6V0D2Q8N8Y2 350 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 Q8NBF4 154 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 CCDC197Q8NCU1 140 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 OR52K1Q8NGK4 314 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 OR10G8Q8NGN5 311 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 TCP10LQ8TDR4 215 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 C2orf15Q8WU43 125 aaKnown RBP3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 RASL10AQ92737 203 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 CABS1Q96KC9 395 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 KLF6Q99612 283 aaPredicted RBP3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 IL12RB2Q99665 862 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 PAIP2Q9BPZ3 127 aaKnown RBP3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 OLA1Q9NTK5 396 aaKnown RBP3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 COMMD8Q9NX08 183 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 CLIC5Q9NZA1 410 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 VANGL2Q9ULK5 521 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 EXO1Q9UQ84 846 aaKnown RBP3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 MAD1L1Q9Y6D9 718 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 IKBKGQ9Y6K9 419 aa3.39□□□□□ -1.87
CTHRC1-204ENST00000520880 DOCK6Q96HP0 2047 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 GOLGA6L7A0A1B0GV03 622 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 CCT8L1PA6NM43 557 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 COPEO14579 308 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 PSMD3O43242 534 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 SH3BP5O60239 455 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 KIAA0754O94854 1291 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 SEC24AO95486 1093 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 JCHAINP01591 159 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 IGHV3-13P01766 116 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 RB1P06400 928 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 CLTBP09497 229 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 CCNB1P14635 433 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 MMP9P14780 707 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 HMGA1P17096 107 aaKnown RBP3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 OR1D2P34982 312 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 RFC2P35250 354 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 ADRA1AP35348 466 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 MAGEA12P43365 314 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 NPY2RP49146 381 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 NDST2P52849 883 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 GEMP55040 296 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 HERV-K104P61576 105 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 RPL10AP62906 217 aaKnown RBP3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 DEFB103AP81534 67 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 PAX8Q06710 450 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 IFT88Q13099 833 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 DNAJC3Q13217 504 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 LY6DQ14210 128 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 SQLEQ14534 574 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 PRPSAP1Q14558 356 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 ITPRIPL2Q3MIP1 535 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 ANKRD20A4Q4UJ75 823 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 PHLDA2Q53GA4 152 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 LACTB2Q53H82 288 aaPredicted RBP3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 SPANXN3Q5MJ09 141 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 C10orf120Q5SQS8 335 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 HHATQ5VTY9 493 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 SNX30Q5VWJ9 437 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 KDELC1Q6UW63 502 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 CES3Q6UWW8 571 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 TIFABQ6ZNK6 161 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 Q6ZR54 194 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 FAM47EQ6ZV65 393 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 CHST9Q7L1S5 443 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 OTOAQ7RTW8 1153 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 SPATA21Q7Z572 469 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 TMCO2Q7Z6W1 182 aaPredicted RBP3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 TMEM135Q86UB9 458 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 LRRC49Q8IUZ0 686 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 C11orf53Q8IXP5 236 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 SLC39A11Q8N1S5 342 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 UMODL1-AS1Q8N2C9 162 aa3.38□□□□□ -1.87
CTHRC1-204ENST00000520880 OTUD6BQ8N6M0 293 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms