RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 ZNF552Q9H707 407 aaPredicted RBP16.43■□□□□ 0.22
SDC2-205ENST00000520233 A4GALTQ9NPC4 353 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 STMN3Q9NZ72 180 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 ADA2Q9NZK5 511 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 MRTO4Q9UKD2 239 aaKnown RBP16.43■□□□□ 0.22
SDC2-205ENST00000520233 LIPT1Q9Y234 373 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 NPFFR2Q9Y5X5 522 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 URB1O60287 2271 aaKnown RBP16.43■□□□□ 0.22
SDC2-205ENST00000520233 APC2O95996 2303 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 CDK2AP1O14519 115 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 ZNF354AO60765 605 aaPredicted RBP16.42■□□□□ 0.22
SDC2-205ENST00000520233 KCNK2O95069 426 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 ITGB2P05107 769 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 TFPTP0C1Z6 253 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 ARAFP10398 606 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 ABCD3P28288 659 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 KRT20P35900 424 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 LIPEQ05469 1076 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 RBBP4Q09028 425 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 PLCXD2Q0VAA5 305 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 TBR1Q16650 682 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 CYP51A1Q16850 503 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 DCST2Q5T1A1 773 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 OPN5Q6U736 354 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 LYPD8Q6UX82 237 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 ISLR2Q6UXK2 745 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 BNC2Q6ZN30 1099 aaPredicted RBP16.42■□□□□ 0.22
SDC2-205ENST00000520233 C16orf62Q7Z3J2 963 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 METTL25Q8N6Q8 603 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 FDCSPQ8NFU4 85 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 TMBIM1Q969X1 311 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 OMA1Q96E52 524 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 ZNF583Q96ND8 569 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 LMF1Q96S06 567 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 ABI3Q9P2A4 366 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 P2RX2Q9UBL9 471 aa16.42■□□□□ 0.22
SDC2-205ENST00000520233 PRAMEF27A3QJZ7 478 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 TMEM247A6NEH6 219 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 FAM220BPB1ANY3 271 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 DNAJA2O60884 412 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 REM1O75628 298 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 PPM1BO75688 479 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 IL33O95760 270 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 FBXO45P0C2W1 286 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 TMED10P49755 219 aaKnown RBP16.41■□□□□ 0.22
SDC2-205ENST00000520233 PNLIPRP2P54317 469 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 PSMD4P55036 377 aaKnown RBP16.41■□□□□ 0.22
SDC2-205ENST00000520233 NCALDP61601 193 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 FUT5Q11128 374 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 MFAP5Q13361 173 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 RAPSNQ13702 412 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 GNA13Q14344 377 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 ADRM1Q16186 407 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.41■□□□□ 0.22
SDC2-205ENST00000520233 ZNF630Q2M218 657 aaPredicted RBP16.41■□□□□ 0.22
SDC2-205ENST00000520233 SPATS1Q496A3 300 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 SAMD4BQ5PRF9 694 aaKnown RBP16.41■□□□□ 0.22
SDC2-205ENST00000520233 YTHDF3Q7Z739 585 aaKnown RBP16.41■□□□□ 0.22
SDC2-205ENST00000520233 PTOV1Q86YD1 416 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 ZZZ3Q8IYH5 903 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 DND1Q8IYX4 353 aaKnown RBP16.41■□□□□ 0.22
SDC2-205ENST00000520233 PRR22Q8IZ63 422 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 BEST3Q8N1M1 668 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 ARHGAP24Q8N264 748 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 DIO2Q92813 273 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 REXO5Q96IC2 774 aaKnown RBP16.41■□□□□ 0.22
SDC2-205ENST00000520233 TRNT1Q96Q11 434 aaKnown RBP16.41■□□□□ 0.22
SDC2-205ENST00000520233 SDF2Q99470 211 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 G6PC3Q9BUM1 346 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 ALG2Q9H553 416 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 PIF1Q9H611 641 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 POLE3Q9NRF9 147 aa16.41■□□□□ 0.22
SDC2-205ENST00000520233 PRPF19Q9UMS4 504 aaKnown RBP16.41■□□□□ 0.22
SDC2-205ENST00000520233 PCDHGA9Q9Y5G4 932 aaKnown RBP16.41■□□□□ 0.22
SDC2-205ENST00000520233 TSPAN2O60636 221 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 IGKV1D-16P01601 117 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 BCHEP06276 602 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 GUSBP08236 651 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 NR2F1P10589 423 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 LCN1P31025 176 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 SOX3P41225 446 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 GSK3BP49841 420 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 MAPK11Q15759 364 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 SYPL1Q16563 259 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 ZSCAN26Q16670 478 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 GPAT3Q53EU6 434 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 CCNJQ5T5M9 372 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 AP1ARQ63HQ0 302 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 ERICH5Q6P6B1 374 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 FIGNL1Q6PIW4 674 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 SLC30A8Q8IWU4 369 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 GPALPP1Q8IXQ4 340 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 TMEM156Q8N614 296 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 ANKFN1Q8N957 763 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 C11orf65Q8NCR3 313 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 OR2T12Q8NG77 320 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 SLC38A5Q8WUX1 472 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 ASB15Q8WXK1 588 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 MAL2Q969L2 176 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 ZNF350Q9GZX5 532 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms