RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 TMUB1Q9BVT8 246 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 MID1IP1Q9NPA3 183 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 GIMAP4Q9NUV9 329 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 TAS2R7Q9NYW3 318 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 PSMC3IPQ9P2W1 217 aaPredicted RBP11.29□□□□□ -0.6
CSMD1-205ENST00000519623 TBK1Q9UHD2 729 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 WIF1Q9Y5W5 379 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 CCDC151A5D8V7 595 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 CLCA1A8K7I4 914 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 C17orf51A8MQB3 221 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 TMIGD3P0DMS9 266 aaPredicted RBP11.28□□□□□ -0.6
CSMD1-205ENST00000519623 GRK2P25098 689 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 TACR1P25103 407 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 GCKP35557 465 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 DGKQP52824 942 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 CLDN18P56856 261 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 B3GALT5-AS1P59052 145 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 PSPHP78330 225 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 FAM71E1Q6IPT2 247 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 ZYG11AQ6WRX3 759 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 TRIM46Q7Z4K8 759 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 IFNEQ86WN2 208 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 FAM9CQ8IZT9 166 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 CCNYL1Q8N7R7 359 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 CEP112Q8N8E3 955 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 WNT2BQ93097 391 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 EFHD2Q96C19 240 aaPredicted RBP11.28□□□□□ -0.6
CSMD1-205ENST00000519623 CCDC126Q96EE4 140 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 ZFP3Q96NJ6 502 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 BBS4Q96RK4 519 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 TM9SF2Q99805 663 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 SHCBP1LQ9BZQ2 653 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 STMN4Q9H169 189 aaPredicted RBP11.28□□□□□ -0.6
CSMD1-205ENST00000519623 TNFRSF12AQ9NP84 129 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 TAS2R9Q9NYW1 312 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 CLCF1Q9UBD9 225 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 C19orf53Q9UNZ5 99 aaPredicted RBP11.28□□□□□ -0.6
CSMD1-205ENST00000519623 CCL27Q9Y4X3 112 aa11.28□□□□□ -0.6
CSMD1-205ENST00000519623 ZNF469Q96JG9 3925 aaPredicted RBP11.28□□□□□ -0.6
CSMD1-205ENST00000519623 A0A087WV62 115 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 EEF1E1-BLOC1S5C9J1V9 151 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 H0Y3Z8 333 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 KIF2AO00139 706 aaPredicted RBP11.27□□□□□ -0.61
CSMD1-205ENST00000519623 PLOD2O00469 737 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 EEF1E1O43324 174 aaKnown RBP11.27□□□□□ -0.61
CSMD1-205ENST00000519623 FADS1O60427 444 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 PROCP04070 461 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 JUNP05412 331 aaKnown RBP11.27□□□□□ -0.61
CSMD1-205ENST00000519623 MYL2P10916 166 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 ZNF708P17019 499 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 CHMP24386 653 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 DPP4P27487 766 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 IL12BP29460 328 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 KRT20P35900 424 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 SORDQ00796 357 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 ZNF763Q0D2J5 394 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 BCL2A1Q16548 175 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 CYP27C1Q4G0S4 372 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 SPDYAQ5MJ70 313 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 AAGABQ6PD74 315 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 TGIF2LYQ8IUE0 185 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 CNPY4Q8N129 248 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 FADS6Q8N9I5 356 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 GOT1L1Q8NHS2 421 aaPredicted RBP11.27□□□□□ -0.61
CSMD1-205ENST00000519623 KIF18AQ8NI77 898 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 INTS12Q96CB8 462 aaKnown RBP11.27□□□□□ -0.61
CSMD1-205ENST00000519623 RMND5BQ96G75 393 aaPredicted RBP11.27□□□□□ -0.61
CSMD1-205ENST00000519623 RHOXF2Q9BQY4 288 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 SFXN3Q9BWM7 321 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 RTN4RQ9BZR6 473 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 GLIPR2Q9H4G4 154 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 MYNNQ9NPC7 610 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 GRID1Q9ULK0 1009 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 PLEKHA6Q9Y2H5 1048 aa11.27□□□□□ -0.61
CSMD1-205ENST00000519623 WBP11Q9Y2W2 641 aaKnown RBP11.27□□□□□ -0.61
CSMD1-205ENST00000519623 A8MXE2 369 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 UPK1AO00322 258 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 HCRTR2O43614 444 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 PLIN3O60664 434 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 PSMG1O95456 288 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 TGM6O95932 706 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 SHBGP04278 402 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 CD99P14209 185 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 DNASE1P24855 282 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 MC3RP41968 323 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 NCBP2P52298 156 aaKnown RBP eCLIP11.26□□□□□ -0.61
CSMD1-205ENST00000519623 DSCR4P56555 118 aaPredicted RBP11.26□□□□□ -0.61
CSMD1-205ENST00000519623 CLDN15P56746 228 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 DNAJB13P59910 316 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 NAA20P61599 178 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 MRPS22P82650 360 aaKnown RBP11.26□□□□□ -0.61
CSMD1-205ENST00000519623 GAB1Q13480 694 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 KIAA0040Q15053 153 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 NOXRED1Q6NXP6 359 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 FRMD7Q6ZUT3 714 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 OR2L13Q8N349 312 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 FAM76AQ8TAV0 307 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 MBD6Q96DN6 1003 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 ELP4Q96EB1 424 aa11.26□□□□□ -0.61
CSMD1-205ENST00000519623 SFXN2Q96NB2 322 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms