RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 CARM1Q86X55 608 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 PEX5LQ8IYB4 626 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 ZNF615Q8N8J6 731 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 OR52P1PQ8NH57 321 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 C16orf52Q8NHV5 167 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 VANGL1Q8TAA9 524 aaPredicted RBP7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 MAGEE2Q8TD90 523 aaPredicted RBP7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 PTPMT1Q8WUK0 201 aaPredicted RBP7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 APOBEC4Q8WW27 367 aaKnown RBP7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 DAZLQ92904 295 aaKnown RBP7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 FKBP10Q96AY3 582 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 NRBF2Q96F24 287 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 RMND5BQ96G75 393 aaPredicted RBP7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 ZNF570Q96NI8 536 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 PIP5K1AQ99755 562 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 RBM4BQ9BQ04 359 aaKnown RBP7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 LRFN3Q9BTN0 628 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 RBM4Q9BWF3 364 aaKnown RBP7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 OSBPL11Q9BXB4 747 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 OSBPL10Q9BXB5 764 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 COL25A1Q9BXS0 654 aaPredicted RBP7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 AMBRA1Q9C0C7 1298 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 OR8D2Q9GZM6 311 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 ZNF350Q9GZX5 532 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 QRSL1Q9H0R6 528 aaKnown RBP7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 IRF2BPLQ9H1B7 796 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 PARD6AQ9NPB6 346 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 POLE3Q9NRF9 147 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 KLHL28Q9NXS3 571 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 SLC39A1Q9NY26 324 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 VNN3Q9NY84 501 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 MKLN1Q9UL63 735 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 ZNF232Q9UNY5 417 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 CFL2Q9Y281 166 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 SLC9A8Q9Y2E8 581 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 IFT52Q9Y366 437 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 TESMINQ9Y4I5 508 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 AP4B1Q9Y6B7 739 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 OTOGLQ3ZCN5 2332 aa7.1□□□□□ -1.27
SCARNA20.1-201ENST00000516009 GXYLT2A0PJZ3 443 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 PRAMEF25A6NGN4 478 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 VSTM2BA6NLU5 285 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 IDSB3KWA1 339 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 TNFRSF11BO00300 401 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 DENRO43583 198 aaKnown RBP7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 GDF9O60383 454 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 FOXD2O60548 495 aaPredicted RBP7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 FCMRO60667 390 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 CSO75390 466 aaKnown RBP7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 KCNK2O95069 426 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 ZIC2O95409 532 aaPredicted RBP7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 DDAH2O95865 285 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 ALBP02768 609 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 CLPSP04118 112 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 ALPLP05186 524 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 DBIP07108 87 aaKnown RBP7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 KLK3P07288 261 aaPredicted RBP7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 THBS1P07996 1170 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 GUSBP08236 651 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 RPSAP08865 295 aaKnown RBP7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 ZNF28P17035 718 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 RRM2P31350 389 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 TRHRP34981 398 aaPredicted RBP7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 YAP1P46937 504 aaKnown RBP7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 EFNA3P52797 238 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 EMP2P54851 167 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 CDH12P55289 794 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 SLC37A1P57057 533 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 RAB15P59190 212 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 PPP2R2BQ00005 443 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 INSM1Q01101 510 aaPredicted RBP7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 SPIBQ01892 262 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 GK3PQ14409 553 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 ISXQ2M1V0 245 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 EIPR1Q53HC9 387 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 C6orf52Q5T4I8 152 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 DCAF12Q5T6F0 453 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 FIGNL1Q6PIW4 674 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 DHRS4L2Q6PKH6 230 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 NPSR1Q6W5P4 371 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 SHISA6Q6ZSJ9 500 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 TSEN54Q7Z6J9 526 aaKnown RBP7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 TMEM179BQ7Z7N9 219 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 HMGN2P46Q86SG4 172 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 VRK2Q86Y07 508 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 HS3ST5Q8IZT8 346 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 MORN4Q8NDC4 146 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 SLC2A12Q8TD20 617 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 METTL21AQ8WXB1 218 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 PMM1Q92871 262 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 MR1Q95460 341 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 ZG16BQ96DA0 208 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 SENP5Q96HI0 755 aaPredicted RBP7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 LRFN5Q96NI6 719 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 RDH12Q96NR8 316 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 SLC46A1Q96NT5 459 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 EPYCQ99645 322 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 ARHGDIGQ99819 225 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 ITPAQ9BY32 194 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 SAP130Q9H0E3 1048 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms