RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 OR2L13Q8N349 312 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 WDSUB1Q8N9V3 476 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 CA5BP1Q8WTZ4 195 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 PIK3R3Q92569 461 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 MARVELD3Q96A59 401 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 NTNG2Q96CW9 530 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 METTL2AQ96IZ6 378 aaKnown RBP10.49□□□□□ -0.73
VCAN-212ENST00000515397 PPP3R2Q96LZ3 170 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 SECISBP2Q96T21 854 aaKnown RBP10.49□□□□□ -0.73
VCAN-212ENST00000515397 SORT1Q99523 831 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 OSBPL11Q9BXB4 747 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 RTN4RQ9BZR6 473 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 UBQLN3Q9H347 655 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 TP63Q9H3D4 680 aaPredicted RBP10.49□□□□□ -0.73
VCAN-212ENST00000515397 ACKR4Q9NPB9 350 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 PNPOQ9NVS9 261 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 B4GALT7Q9UBV7 327 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 FBXL2Q9UKC9 423 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 C15orf41Q9Y2V0 281 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 WBP11Q9Y2W2 641 aaKnown RBP10.49□□□□□ -0.73
VCAN-212ENST00000515397 CREBBPQ92793 2442 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 CACNA1CQ13936 2221 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 NCOA6Q14686 2063 aaPredicted RBP10.48□□□□□ -0.73
VCAN-212ENST00000515397 A0A087WV62 115 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 OR6C70A6NIJ9 312 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 PLOD2O00469 737 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 BCKDKO14874 412 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 SCO2O43819 266 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 COQ9O75208 318 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 IGKV1D-16P01601 117 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 G6PDP11413 515 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 SERPINB5P36952 375 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 ADH7P40394 386 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 STARP49675 285 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 WDR4P57081 412 aaKnown RBP10.48□□□□□ -0.73
VCAN-212ENST00000515397 STX5Q13190 355 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 STX3Q13277 289 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 PDE7AQ13946 482 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 TBCELQ5QJ74 424 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 HHATQ5VTY9 493 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 TMEM211Q6ICI0 200 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 SLC30A6Q6NXT4 461 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 LRIG3Q6UXM1 1119 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 RNF165Q6ZSG1 346 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 LIX1LQ8IVB5 337 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 FAM83FQ8NEG4 500 aaPredicted RBP10.48□□□□□ -0.73
VCAN-212ENST00000515397 NUP43Q8NFH3 380 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 PHF10Q8WUB8 498 aaKnown RBP10.48□□□□□ -0.73
VCAN-212ENST00000515397 SLC9A6Q92581 669 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 RND1Q92730 232 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 SARAFQ96BY9 339 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 TMCO6Q96DC7 493 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 ERP27Q96DN0 273 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 PGM2Q96G03 612 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 TMEM41AQ96HV5 264 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 TIMP4Q99727 224 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 TTYH2Q9BSA4 534 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 STMN4Q9H169 189 aaPredicted RBP10.48□□□□□ -0.73
VCAN-212ENST00000515397 AKTIPQ9H8T0 292 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 COQ3Q9NZJ6 369 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 CBLCQ9ULV8 474 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 RPH3AQ9Y2J0 694 aaPredicted RBP10.48□□□□□ -0.73
VCAN-212ENST00000515397 TMED5Q9Y3A6 229 aa10.48□□□□□ -0.73
VCAN-212ENST00000515397 NUP214P35658 2090 aaPredicted RBP10.48□□□□□ -0.73
VCAN-212ENST00000515397 CSMD1Q96PZ7 3565 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 A0A1W2PRB8 838 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 TMEM120BA0PK00 339 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 OR14I1A6ND48 311 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 TMEM114B3SHH9 223 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 SNPHO15079 494 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 SCAMP2O15127 329 aaKnown RBP10.47□□□□□ -0.73
VCAN-212ENST00000515397 TM9SF1O15321 606 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 BIRC5O15392 142 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 PSMG1O95456 288 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 HPNP05981 417 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 TUBBP07437 444 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 MYZAPP0CAP1 466 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 PRPS2P11908 318 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 BMP7P18075 431 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 ASMTP46597 345 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 RNF144AP50876 292 aaPredicted RBP10.47□□□□□ -0.73
VCAN-212ENST00000515397 DIO3P55073 304 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 MAGOHP61326 146 aaKnown RBP10.47□□□□□ -0.73
VCAN-212ENST00000515397 SRYQ05066 204 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 BST1Q10588 318 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 SNTB1Q13884 538 aaKnown RBP10.47□□□□□ -0.73
VCAN-212ENST00000515397 PGS1Q32NB8 556 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 C1orf185Q5T7R7 199 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 FIGNL1Q6PIW4 674 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 B3GNT6Q6ZMB0 384 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 SEM1Q6ZVN7 128 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 MARCH3Q86UD3 253 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 ULK2Q8IYT8 1036 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 CLEC4FQ8N1N0 589 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 OR5M1Q8NGP8 315 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 GPR151Q8TDV0 419 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 ZBED6CLQ96FA7 236 aaPredicted RBP10.47□□□□□ -0.73
VCAN-212ENST00000515397 RMND5BQ96G75 393 aaPredicted RBP10.47□□□□□ -0.73
VCAN-212ENST00000515397 SLC35A4Q96G79 324 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 UGT2B28Q9BY64 529 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms