RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 UFD1Q92890 307 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 KATNB1Q9BVA0 655 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 JAM3Q9BX67 310 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 TPK1Q9H3S4 243 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 SFXN1Q9H9B4 322 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 KLHL28Q9NXS3 571 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 SPHK1Q9NYA1 384 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 PLEKHM1Q9Y4G2 1056 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 HEBP2Q9Y5Z4 205 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 ZNF780BQ9Y6R6 833 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 TRDV1A0A1B0GX56 115 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 A0A1W2PS29 197 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 RNGTTO60942 597 aaKnown RBP16.4■□□□□ 0.22
SNX2-213ENST00000514949 GSTT2P0CG29 244 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 GSTT2BP0CG30 244 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 TRAPPC2P0DI81 140 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 TRAPPC2BP0DI82 140 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 C8orf89P0DMQ9 161 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 RPS5P46782 204 aaKnown RBP16.4■□□□□ 0.22
SNX2-213ENST00000514949 TGM4P49221 684 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 HNRNPA0Q13151 305 aaKnown RBP16.4■□□□□ 0.22
SNX2-213ENST00000514949 DDI2Q5TDH0 399 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 TMEM53Q6P2H8 277 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 OR9A2Q8NGT5 310 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 ZNF486Q96H40 463 aaPredicted RBP16.4■□□□□ 0.22
SNX2-213ENST00000514949 C10orf90Q96M02 699 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 TRIM45Q9H8W5 580 aaPredicted RBP16.4■□□□□ 0.22
SNX2-213ENST00000514949 CTPS2Q9NRF8 586 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 OR6C2Q9NZP2 312 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 EXOGQ9Y2C4 368 aaKnown RBP16.4■□□□□ 0.22
SNX2-213ENST00000514949 GSTK1Q9Y2Q3 226 aa16.4■□□□□ 0.22
SNX2-213ENST00000514949 A0A1W2PQL4 384 aaPredicted RBP16.39■□□□□ 0.21
SNX2-213ENST00000514949 SURF4O15260 269 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 OR5F1O95221 314 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 ZIC2O95409 532 aaPredicted RBP16.39■□□□□ 0.21
SNX2-213ENST00000514949 AGR2O95994 175 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 STATHP02808 62 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 ASGR2P07307 311 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 SDC2P34741 201 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 TRHRP34981 398 aaPredicted RBP16.39■□□□□ 0.21
SNX2-213ENST00000514949 RPS25P62851 125 aaKnown RBP16.39■□□□□ 0.21
SNX2-213ENST00000514949 HTRA3P83110 453 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 SGCGQ13326 291 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 ZNF628Q5EBL2 1059 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 RAB43Q86YS6 212 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 TMEM145Q8NBT3 493 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 GATAD2BQ8WXI9 593 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 GAL3ST3Q96A11 431 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 ZNF649Q9BS31 505 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 PRR14Q9BWN1 585 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 SYNDIG1Q9H7V2 258 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 GOLGA4Q13439 2230 aaKnown RBP16.39■□□□□ 0.21
SNX2-213ENST00000514949 A0A1W2PQ09 198 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 RGS13O14921 159 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 IGHA1P01876 353 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 RAB8AP61006 207 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 MXD1Q05195 221 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 FAM214AQ32MH5 1076 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 ZNF517Q6ZMY9 492 aaPredicted RBP16.39■□□□□ 0.21
SNX2-213ENST00000514949 NUDT18Q6ZVK8 323 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 RRM2BQ7LG56 351 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 PAQR7Q86WK9 346 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 SAMD14Q8IZD0 417 aaPredicted RBP16.39■□□□□ 0.21
SNX2-213ENST00000514949 TMEM203Q969S6 136 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 C1GALT1C1Q96EU7 318 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 SLC35A4Q96G79 324 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 FAM46AQ96IP4 442 aaKnown RBP16.39■□□□□ 0.21
SNX2-213ENST00000514949 NEDD4LQ96PU5 975 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 TRMT61BQ9BVS5 477 aaKnown RBP16.39■□□□□ 0.21
SNX2-213ENST00000514949 TEX12Q9BXU0 123 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 SLC17A9Q9BYT1 436 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 MTHFD2LQ9H903 347 aaPredicted RBP16.39■□□□□ 0.21
SNX2-213ENST00000514949 PRDM9Q9NQV7 894 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 CNIH4Q9P003 139 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 KLF15Q9UIH9 416 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 GPR52Q9Y2T5 361 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 COLEC10Q9Y6Z7 277 aa16.39■□□□□ 0.21
SNX2-213ENST00000514949 FABP12A6NFH5 140 aa16.38■□□□□ 0.21
SNX2-213ENST00000514949 CPSF4LA6NMK7 179 aaKnown RBP16.38■□□□□ 0.21
SNX2-213ENST00000514949 CLEC2LP0C7M8 214 aa16.38■□□□□ 0.21
SNX2-213ENST00000514949 CCNYL3P0C7X3 344 aa16.38■□□□□ 0.21
SNX2-213ENST00000514949 IGFALSP35858 605 aa16.38■□□□□ 0.21
SNX2-213ENST00000514949 SLC1A3P43003 542 aa16.38■□□□□ 0.21
SNX2-213ENST00000514949 DSG2Q14126 1118 aa16.38■□□□□ 0.21
SNX2-213ENST00000514949 CRTC2Q53ET0 693 aaPredicted RBP16.38■□□□□ 0.21
SNX2-213ENST00000514949 NXNL2Q5VZ03 156 aa16.38■□□□□ 0.21
SNX2-213ENST00000514949 CDC73Q6P1J9 531 aa16.38■□□□□ 0.21
SNX2-213ENST00000514949 MBOAT2Q6ZWT7 520 aa16.38■□□□□ 0.21
SNX2-213ENST00000514949 C16orf62Q7Z3J2 963 aa16.38■□□□□ 0.21
SNX2-213ENST00000514949 VN1R4Q7Z5H5 301 aa16.38■□□□□ 0.21
SNX2-213ENST00000514949 CACUL1Q86Y37 369 aa16.38■□□□□ 0.21
SNX2-213ENST00000514949 ARIH2OSQ8N7S6 290 aa16.38■□□□□ 0.21
SNX2-213ENST00000514949 OR52P1PQ8NH57 321 aa16.38■□□□□ 0.21
SNX2-213ENST00000514949 NT5CQ8TCD5 201 aa16.38■□□□□ 0.21
SNX2-213ENST00000514949 SOSTQ9BQB4 213 aa16.38■□□□□ 0.21
SNX2-213ENST00000514949 TWSG1Q9GZX9 223 aa16.38■□□□□ 0.21
SNX2-213ENST00000514949 NEK6Q9HC98 313 aa16.38■□□□□ 0.21
SNX2-213ENST00000514949 YARS2Q9Y2Z4 477 aaKnown RBP16.38■□□□□ 0.21
SNX2-213ENST00000514949 TBC1D3KA0A087X1G2 549 aa16.37■□□□□ 0.21
SNX2-213ENST00000514949 TBC1D3FA6NER0 549 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms