RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 SLAMF9Q96A28 289 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 TCEAL4Q96EI5 215 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 TRNT1Q96Q11 434 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 TXN2Q99757 166 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 ATG101Q9BSB4 218 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 GSX2Q9BZM3 304 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 TM6SF2Q9BZW4 377 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 SEMA6CQ9H3T2 930 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 NECTIN3Q9NQS3 549 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 AGPAT4Q9NRZ5 378 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 MARK1Q9P0L2 795 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 CCL27Q9Y4X3 112 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 INSL5Q9Y5Q6 135 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 KIAA1549LQ6ZVL6 1849 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 A0A087X0M5 115 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 A0A1B0GX30 115 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 TMEM238C9JI98 176 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 NPIPA7E9PJI5 369 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 ARPC2O15144 300 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 CRCPO75575 148 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 GABARAPO95166 117 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 PRAMEF1O95521 474 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 TRBC1P01850 177 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 GUSBP08236 651 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 SNRNP70P08621 437 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 LINC00614P0C842 121 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 NPIPA8P0DM63 369 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 GAAP10253 952 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 PAX6P26367 422 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 RPS26P62854 115 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 CAMK2DQ13557 499 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 RPS6KA2Q15349 733 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 TBCELQ5QJ74 424 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 FAM151BQ6UXP7 276 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 SERPINA9Q86WD7 417 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 AQP12AQ8IXF9 295 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 PRSS35Q8N3Z0 413 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 CDYL2Q8N8U2 506 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 OR5T3Q8NGG3 340 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 JAM3Q9BX67 310 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 SEPSECSQ9HD40 501 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 CHD7Q9P2D1 2997 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 RNF103-CHMP3A0A140T963 221 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 A0A1W2PN81 502 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 PDCD5O14737 125 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 PRMT5O14744 637 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 KDM4BO94953 1096 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 ANXA7P20073 488 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 DDTP30046 118 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 CHRNA7P36544 502 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 RAB5BP61020 215 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 C2orf80Q0P641 193 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 PLA2G7Q13093 441 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 ZNF404Q494X3 552 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 FBXO42Q6P3S6 717 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 ANKRD33Q7Z3H0 272 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 CMIPQ8IY22 773 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 TCEAL8Q8IYN2 117 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 STK40Q8N2I9 435 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 OR4F6Q8NGB9 312 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 NEK7Q8TDX7 302 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 REG4Q9BYZ8 158 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 CIPCQ9C0C6 399 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 SLIRPQ9GZT3 109 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 PARD6AQ9NPB6 346 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 HEBP1Q9NRV9 189 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 KCNIP3Q9Y2W7 256 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 PKP3Q9Y446 797 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 MAB21L2Q9Y586 359 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 NOTCH4Q99466 2003 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 PLSCR5A0PG75 271 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 INPP4BO15327 924 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 MMP20O60882 483 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 HRH2P25021 359 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 LIPAP38571 399 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 GSK3BP49841 420 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 RBX1P62877 108 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 NFATC2Q13469 925 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 TRA2AQ13595 282 aaKnown RBP eCLIP7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 KIAA0040Q15053 153 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 DEFB115Q30KQ5 88 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 ARMC12Q5T9G4 340 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 PACRGLQ8N7B6 248 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 POMGNT2Q8NAT1 580 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 ZNF296Q8WUU4 475 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 LMLNQ96KR4 655 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 RNF145Q96MT1 663 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 TMEM74Q96NL1 305 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 SEPHS2Q99611 448 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 LRRC3Q9BY71 257 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 SEMA4CQ9C0C4 833 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 ING2Q9H160 280 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 MUC13Q9H3R2 512 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 IL26Q9NPH9 171 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 LYARQ9NX58 379 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 CLEC5AQ9NY25 188 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 INTS6Q9UL03 887 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 SLC6A5Q9Y345 797 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 PCDHB1Q9Y5F3 818 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 DHRS12A0PJE2 317 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms