RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	MUC21	Q5SSG8	566 aa		4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	PRR5L	Q6MZQ0	368 aa		4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ARHGAP11A	Q6P4F7	1023 aa		4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	BTNL3	Q6UXE8	466 aa		4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	HACD2	Q6Y1H2	254 aa		4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	C16orf62	Q7Z3J2	963 aa		4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ANKRD37	Q7Z713	158 aa		4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	TMEM17	Q86X19	198 aa		4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	SPEM1	Q8N4L4	309 aa		4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	SAMD12	Q8N8I0	201 aa		4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	SYT14	Q8NB59	555 aa		4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	NANP	Q8TBE9	248 aa		4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	RPL3L	Q92901	407 aa	Known RBP	4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ATXN7L3B	Q96GX2	97 aa		4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	SYT15	Q9BQS2	421 aa		4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	CABLES2	Q9BTV7	478 aa		4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	STRADB	Q9C0K7	418 aa		4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	COMMD4	Q9H0A8	199 aa		4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	LIME1	Q9H400	295 aa		4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	IL1RL2	Q9HB29	575 aa		4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ELL3	Q9HB65	397 aa	Predicted RBP	4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	EXOG	Q9Y2C4	368 aa	Known RBP	4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	EXOSC1	Q9Y3B2	195 aa	Known RBP	4.19	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	CTAGE15	A4D2H0	777 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	METTL21EP	A6NDL7	271 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	PCP4L1	A6NKN8	68 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	FAM74A7	A6NL05	159 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	TFEC	O14948	347 aa	Predicted RBP	4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	TPST2	O60704	377 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	OPN1LW	P04000	364 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	CCDC159	P0C7I6	412 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	TOP1	P11387	765 aa	Known RBP	4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	CEBPD	P49716	269 aa	Predicted RBP	4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	PLA2G16	P53816	162 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	GSTO1	P78417	241 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	BEX3	Q00994	111 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	NCBP1	Q09161	790 aa	Known RBP	4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	CD226	Q15762	336 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	SYPL1	Q16563	259 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	FAM74A3	Q4VXF1	159 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	CYBRD1	Q53TN4	286 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	C10orf120	Q5SQS8	335 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	CELF3	Q5SZQ8	465 aa	Known RBP	4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	TAF3	Q5VWG9	929 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	SLX4IP	Q5VYV7	408 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	SCYL2	Q6P3W7	929 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	APOOL	Q6UXV4	268 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	NUFIP2	Q7Z417	695 aa	Known RBP	4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	KIAA1328	Q86T90	577 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	CTAGE6	Q86UF2	777 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	CARM1	Q86X55	608 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	LRRC43	Q8N309	656 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	METTL4	Q8N3J2	472 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	OR8J1	Q8NGP2	316 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	TPD52L3	Q96J77	140 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	RIT2	Q99578	217 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	NPAS2	Q99743	824 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	FAM173A	Q9BQD7	235 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	SLC30A2	Q9BRI3	323 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	FEM1A	Q9BSK4	669 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	TMEM43	Q9BTV4	400 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	MOB1A	Q9H8S9	216 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	SDF2L1	Q9HCN8	221 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ESM1	Q9NQ30	184 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	HYPK	Q9NX55	129 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	NDE1	Q9NXR1	346 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	UTP6	Q9NYH9	597 aa	Known RBP	4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	AIPL1	Q9NZN9	384 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	GNG12	Q9UBI6	72 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	RPH3AL	Q9UNE2	315 aa		4.18	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ESYT2	A0FGR8	921 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	BCLAF3	A2AJT9	711 aa	Known RBP	4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	MFSD2B	A6NFX1	497 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	FAM47DP	A6NHR8	397 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ERVV-2	B6SEH9	535 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	STX7	O15400	261 aa	Known RBP	4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	FRAT2	O75474	233 aa	Predicted RBP	4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	FCGR3A	P08637	254 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	HOXB7	P09629	217 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	DBT	P11182	482 aa	Known RBP	4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	BRCC3	P46736	316 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	STK19	P49842	368 aa	Predicted RBP	4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	EMD	P50402	254 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ATP5I	P56385	69 aa	Predicted RBP	4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ACTR3	P61158	418 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	NTHL1	P78549	312 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	MAP2K1	Q02750	393 aa	Predicted RBP	4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ZNF85	Q03923	595 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	FGL1	Q08830	312 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ATXN7L3	Q14CW9	347 aa	Predicted RBP	4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	RAB35	Q15286	201 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	KIAA1161	Q6NSJ0	714 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ADAMTSL5	Q6ZMM2	481 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006		Q6ZPB1	254 aa	Predicted RBP	4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	LANCL3	Q6ZV70	420 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	STOX1	Q6ZVD7	989 aa		4.17	□□□□□ -1.74
CALCOCO2-222	ENST00000514006	ACOT1	Q86TX2	421 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms