RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 GMPPAQ96IJ6 420 aaPredicted RBP9.79□□□□□ -0.84
DDX41-216ENST00000513562 UBXN10Q96LJ8 280 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 BTBD9Q96Q07 612 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 TACO1Q9BSH4 297 aaKnown RBP9.79□□□□□ -0.84
DDX41-216ENST00000513562 GRIP2Q9C0E4 1043 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 SHARPINQ9H0F6 387 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 ZBTB26Q9HCK0 441 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 LZTFL1Q9NQ48 299 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 SMYD2Q9NRG4 433 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 CES1P1Q9UKY3 287 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 MTO1Q9Y2Z2 717 aaKnown RBP9.79□□□□□ -0.84
DDX41-216ENST00000513562 ROS1P08922 2347 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 MED12LQ86YW9 2145 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 GOLGA6L10A6NI86 522 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 FOXE1O00358 373 aaPredicted RBP9.78□□□□□ -0.84
DDX41-216ENST00000513562 UGDHO60701 494 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 CD8AP01732 235 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 CT45A8P0DMV1 189 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 CT45A9P0DMV2 189 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 SRD5A1P18405 259 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 IVDP26440 423 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 SLC6A8P48029 635 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 PSPHP78330 225 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 SLMAPQ14BN4 828 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 MORF4L2Q15014 288 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 ZKSCAN8Q15776 578 aaPredicted RBP9.78□□□□□ -0.84
DDX41-216ENST00000513562 NRF1Q16656 503 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.78□□□□□ -0.84
DDX41-216ENST00000513562 CTU2Q2VPK5 515 aaKnown RBP9.78□□□□□ -0.84
DDX41-216ENST00000513562 TRMT12Q53H54 448 aaKnown RBP9.78□□□□□ -0.84
DDX41-216ENST00000513562 CT45A2Q5DJT8 189 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 SLC48A1Q6P1K1 146 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 GGNQ86UU5 652 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 DTX2Q86UW9 622 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 TEX9Q8N6V9 391 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 STEAP2Q8NFT2 490 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 KBTBD8Q8NFY9 601 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 OR5M1Q8NGP8 315 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 STAG3L4Q8TBR4 150 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 WDR20Q8TBZ3 569 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 S100PBPQ96BU1 408 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 ATOH8Q96SQ7 321 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 NAP1L3Q99457 506 aaPredicted RBP9.78□□□□□ -0.84
DDX41-216ENST00000513562 NTMT1Q9BV86 223 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 TRIM2Q9C040 744 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 DSN1Q9H410 356 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 ESRP2Q9H6T0 727 aaKnown RBP9.78□□□□□ -0.84
DDX41-216ENST00000513562 ALG9Q9H6U8 611 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 PPP4R1LQ9P1A2 415 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 ADAM29Q9UKF5 820 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 CLEC4AQ9UMR7 237 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 SNX8Q9Y5X2 465 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 AP4B1Q9Y6B7 739 aa9.78□□□□□ -0.84
DDX41-216ENST00000513562 EXPH5Q8NEV8 1989 aa9.77□□□□□ -0.84
DDX41-216ENST00000513562 FAM234BA2RU67 622 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 ELOA3DA6NLF2 546 aaPredicted RBP9.77□□□□□ -0.85
DDX41-216ENST00000513562 SUPT3HB4E1H0 165 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 UBXN8O00124 270 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 PGRMC1O00264 195 aaKnown RBP9.77□□□□□ -0.85
DDX41-216ENST00000513562 SSX4O60224 188 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 DLX3O60479 287 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 KERAO60938 352 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 SUPT3HO75486 399 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 PIAS1O75925 651 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 PLGP00747 810 aaPredicted RBP9.77□□□□□ -0.85
DDX41-216ENST00000513562 PCSK2P16519 638 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 STMN1P16949 149 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 ZNF16P17020 682 aaPredicted RBP9.77□□□□□ -0.85
DDX41-216ENST00000513562 CSNK2A2P19784 350 aaPredicted RBP9.77□□□□□ -0.85
DDX41-216ENST00000513562 IL12BP29460 328 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 EVI2BP34910 448 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 FEN1P39748 380 aaKnown RBP9.77□□□□□ -0.85
DDX41-216ENST00000513562 NUDT6P53370 316 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 PNLIPRP2P54317 469 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 CTBP2P56545 445 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 CORO7P57737 925 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 DSCR9P59020 149 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 DUSP2Q05923 314 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 LTB4RQ15722 352 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 SGCBQ16585 318 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 CPSF6Q16630 551 aaKnown RBP eCLIP9.77□□□□□ -0.85
DDX41-216ENST00000513562 ELOA3BQ3SY89 546 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 ALKBH2Q6NS38 261 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 SEZ6L2Q6UXD5 910 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 NPSR1Q6W5P4 371 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 LARP4Q71RC2 724 aaKnown RBP eCLIP9.77□□□□□ -0.85
DDX41-216ENST00000513562 ISCA2Q86U28 154 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 ANKMY2Q8IV38 441 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 ARIH2OSQ8N7S6 290 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 ELOA3Q8NG57 546 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 C1GALT1C1Q96EU7 318 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 PBKQ96KB5 322 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 VSTM2LQ96N03 204 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 SERPINI1Q99574 410 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 GPR22Q99680 433 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 ALG2Q9H553 416 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 SAYSD1Q9NPB0 183 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 PCDHA9Q9Y5H5 950 aa9.77□□□□□ -0.85
DDX41-216ENST00000513562 C1orf226A1L170 272 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 UBFD1O14562 309 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms