RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 PPCSQ9HAB8 311 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 ANKHQ9HCJ1 492 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 DEPPQ9NTK1 212 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 TBC1D23Q9NUY8 699 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 PSD3Q9NYI0 1048 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 SMARCAL1Q9NZC9 954 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 STOX2Q9P2F5 926 aaPredicted RBP3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 PLAGL1Q9UM63 463 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 DRG1Q9Y295 367 aaKnown RBP3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 AAR2Q9Y312 384 aaKnown RBP3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 HEY1Q9Y5J3 304 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 SLC22A7Q9Y694 548 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 IKBKGQ9Y6K9 419 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 YLPM1P49750 1951 aaKnown RBP3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 CR1P17927 2039 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 SVEP1Q4LDE5 3571 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 A0A1W2PPV9 198 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 PINLYPA6NC86 204 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 SAGE2PA6NJ88 616 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 C3orf70A6NLC5 250 aaPredicted RBP3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 FAM166BA8MTA8 275 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 A8MVJ9 347 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 DEFB108AA8MXU0 73 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 TMCO5BA8MYB1 307 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 H3BNX3 289 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 RCBTB2O95199 551 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 C1orf105O95561 183 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 APOA4P06727 396 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 PSMA3P25788 255 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 CDKN2AP42771 156 aaKnown RBP3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 HSPA7P48741 367 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 COMPP49747 757 aaPredicted RBP3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 GPR143P51810 404 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 NR0B1P51843 470 aaKnown RBP3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 GEMP55040 296 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 DIO3P55073 304 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 TPTEP56180 551 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 SUMO2P61956 95 aaKnown RBP3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 MAT1AQ00266 395 aaKnown RBP3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 HSPA14Q0VDF9 509 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 WASHC5Q12768 1159 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 ACSF3Q4G176 576 aaPredicted RBP3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 ANKRD20A4Q4UJ75 823 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 NHSL2Q5HYW2 709 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 ANKRD20A2Q5SQ80 823 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 C6orf52Q5T4I8 152 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 DEPDC1Q5TB30 811 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 ANKRD20A1Q5TYW2 823 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 ANKRD20A3Q5VUR7 823 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 PGBD2Q6P3X8 592 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 IL20RBQ6UXL0 311 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 RTL4Q6ZR62 310 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 QSOX2Q6ZRP7 698 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 TAS2R42Q7RTR8 314 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 RASGEF1CQ8N431 466 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 KIF2BQ8N4N8 673 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 C2orf73Q8N5S3 287 aaPredicted RBP3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 RFLNBQ8N5W9 214 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 ZNF441Q8N8Z8 693 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 GPATCH11Q8N954 259 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 CAMKVQ8NCB2 501 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 APCDD1LQ8NCL9 501 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 C7orf57Q8NEG2 295 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 IPMKQ8NFU5 416 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 OR13C4Q8NGS5 318 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 OR9A4Q8NGU2 314 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 OR8K3Q8NH51 312 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 MPLKIPQ8TAP9 179 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 GSDMBQ8TAX9 411 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 ZPLD1Q8TCW7 415 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 ABHD5Q8WTS1 349 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 SMPDL3AQ92484 453 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 UCN3Q969E3 161 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 TBC1D20Q96BZ9 403 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 TM4SF19Q96DZ7 209 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 VMP1Q96GC9 406 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 OXNAD1Q96HP4 312 aaPredicted RBP3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 CDKN2AIPNLQ96HQ2 116 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 ART5Q96L15 291 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 FOPNLQ96NB1 174 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 IL17FQ96PD4 163 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 PPP1R2P1Q96PQ5 205 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 TNFRSF13CQ96RJ3 184 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 SIGLEC11Q96RL6 698 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 ERGIC2Q96RQ1 377 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 MACROD1Q9BQ69 325 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 CCDC77Q9BR77 488 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 DPCDQ9BVM2 203 aaPredicted RBP3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 SFXN3Q9BWM7 321 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 RBM24Q9BX46 236 aaKnown RBP3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 FAM234AQ9H0X4 552 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 FAM96AQ9H5X1 160 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 EXO5Q9H790 373 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 UBTD1Q9HAC8 227 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 MRPS30Q9NP92 439 aaKnown RBP3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 TMEM184CQ9NVA4 438 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 NLE1Q9NVX2 485 aaPredicted RBP3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 HPF1Q9NWY4 346 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 AIPL1Q9NZN9 384 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms