RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 CTSKP43235 329 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 CSNK1EP49674 416 aaKnown RBP12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 IGLV3-21P80748 117 aaPredicted RBP12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 CDK5R2Q13319 367 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 RAPSNQ13702 412 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 DGCR6Q14129 220 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 LTB4RQ15722 352 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 CNPY1Q3B7I2 92 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 ARHGAP11BQ3KRB8 267 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 TRIM61Q5EBN2 209 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 GALNT5Q7Z7M9 940 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 ZNF595Q8IYB9 648 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 SLC5A8Q8N695 610 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 CDRT4Q8N9R6 151 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 HOXB13Q92826 284 aaPredicted RBP12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 KAT2AQ92830 837 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 WBP1Q96G27 269 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 ALPK1Q96QP1 1244 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 TSC22D3Q99576 134 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 MAP3K3Q99759 626 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 ARHGDIGQ99819 225 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 PELOQ9BRX2 385 aaKnown RBP12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 SEMA4CQ9C0C4 833 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 SLC38A1Q9H2H9 487 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 PIGUQ9H490 435 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 MTHFD2LQ9H903 347 aaPredicted RBP12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 CCNB1IP1Q9NPC3 277 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 POLE3Q9NRF9 147 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 SEMA5BQ9P283 1151 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 SUSD2Q9UGT4 822 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 TPRKBQ9Y3C4 175 aa12.25□□□□□ -0.45
DEPDC1B-206ENST00000512452 A0A1W2PS29 197 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 HYKKA2RU49 373 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 ZNF860A6NHJ4 632 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 TTC36A6NLP5 189 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 H0YIG0 161 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 SLC1A7O00341 560 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 CHST10O43529 356 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 FGF17O60258 216 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 THBS1P07996 1170 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 ALOX5P09917 674 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 MSL3P1P0C860 447 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 GNSP15586 552 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 GLB1P16278 677 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 ELK4P28324 431 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 GALNSP34059 522 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 GGT2P36268 569 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 AVPR1BP47901 424 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 ARRB1P49407 418 aaPredicted RBP12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 CDH15P55291 814 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 SNRPNP63162 240 aaKnown RBP12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 RPP38P78345 283 aaKnown RBP12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 OLR1P78380 273 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 GPLD1P80108 840 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 IL5RAQ01344 420 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 MAP4K2Q12851 820 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 TUBA3CQ13748 450 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 GRM7Q14831 915 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 LAPTM4AQ15012 233 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 MEP1AQ16819 746 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 PRICKLE4Q2TBC4 344 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 CTU2Q2VPK5 515 aaKnown RBP12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 DEFB133Q30KQ1 61 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 PROX2Q3B8N5 592 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 DCST1Q5T197 706 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 ZNF770Q6IQ21 691 aaPredicted RBP12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 FAM111BQ6SJ93 734 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 ISLR2Q6UXK2 745 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 RBM44Q6ZP01 1051 aaKnown RBP12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 PRSS41Q7RTY9 318 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 GPR141Q7Z602 305 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 KMT5CQ86Y97 462 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 DEPDC4Q8N2C3 294 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 TOR1AIP2Q8NFQ8 470 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 PIGKQ92643 395 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 ANKRD9Q96BM1 317 aaPredicted RBP12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 CTHRC1Q96CG8 243 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 SLC35A4Q96G79 324 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 PRRC1Q96M27 445 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 ZNF578Q96N58 590 aaPredicted RBP12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 YIPF4Q9BSR8 244 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 FUZQ9BT04 418 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 POLR2J2Q9GZM3 115 aaKnown RBP12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 YIPF3Q9GZM5 350 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 POLR2J3Q9H1A7 115 aaKnown RBP12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 ADNPQ9H2P0 1102 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 ANKRD19PQ9H560 264 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 NMNAT1Q9HAN9 279 aaPredicted RBP12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 KLHL28Q9NXS3 571 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 SCN3BQ9NY72 215 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 PTTG2Q9NZH5 202 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 MAT2BQ9NZL9 334 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 SLC13A4Q9UKG4 626 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 CLCA2Q9UQC9 943 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 PCDHGB1Q9Y5G3 927 aa12.24□□□□□ -0.45
DEPDC1B-206ENST00000512452 PTPRBP23467 1997 aa12.23□□□□□ -0.45
DEPDC1B-206ENST00000512452 MN1Q10571 1320 aaPredicted RBP12.23□□□□□ -0.45
DEPDC1B-206ENST00000512452 J3KTA2 159 aa12.23□□□□□ -0.45
DEPDC1B-206ENST00000512452 SGK494L7N484 410 aa12.23□□□□□ -0.45
DEPDC1B-206ENST00000512452 CLDN4O14493 209 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 177.4 ms