RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 STMN4Q9H169 189 aaPredicted RBP12.13□□□□□ -0.47
RNF4-215ENST00000511843 ACKR4Q9NPB9 350 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 KCNK9Q9NPC2 374 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 QPCTLQ9NXS2 382 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 COQ3Q9NZJ6 369 aa12.13□□□□□ -0.47
RNF4-215ENST00000511843 INTS1Q8N201 2190 aaKnown RBP12.13□□□□□ -0.47
RNF4-215ENST00000511843 A0A087WV62 115 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 GXYLT2A0PJZ3 443 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 FIGNL2A6NMB9 653 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 PLOD2O00469 737 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 SNPHO15079 494 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 HNRNPRO43390 633 aaKnown RBP12.12□□□□□ -0.47
RNF4-215ENST00000511843 SCO2O43819 266 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 SERPINE1P05121 402 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 HPNP05981 417 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 GLI4P10075 376 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 CYP4B1P13584 511 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 BGNP21810 368 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 GPC1P35052 558 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 KRT20P35900 424 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 SERPINB5P36952 375 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 ADH7P40394 386 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 RFX3P48380 749 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 CRYZQ08257 329 aaKnown RBP12.12□□□□□ -0.47
RNF4-215ENST00000511843 PDE7AQ13946 482 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 PTGR1Q14914 329 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 PDCD2Q16342 344 aaPredicted RBP12.12□□□□□ -0.47
RNF4-215ENST00000511843 TNFAIP8L3Q5GJ75 292 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 C6orf136Q5SQH8 315 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 C1orf185Q5T7R7 199 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 TMEM211Q6ICI0 200 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 SLC30A6Q6NXT4 461 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 B3GNT6Q6ZMB0 384 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 SZRD1Q7Z422 152 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 GALNT10Q86SR1 603 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 ULK2Q8IYT8 1036 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 ZNF781Q8N8C0 355 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 ANKRD42Q8N9B4 389 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 WDSUB1Q8N9V3 476 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 OTUB1Q96FW1 271 aaPredicted RBP12.12□□□□□ -0.47
RNF4-215ENST00000511843 PPP3R2Q96LZ3 170 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 PAIP2Q9BPZ3 127 aaKnown RBP12.12□□□□□ -0.47
RNF4-215ENST00000511843 RYDENQ9NUL5 291 aaKnown RBP12.12□□□□□ -0.47
RNF4-215ENST00000511843 FBXL2Q9UKC9 423 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 WBP11Q9Y2W2 641 aaKnown RBP12.12□□□□□ -0.47
RNF4-215ENST00000511843 TMED5Q9Y3A6 229 aa12.12□□□□□ -0.47
RNF4-215ENST00000511843 A0A0G2JNJ9 132 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 WDR1O75083 606 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 DHRS4L1P0CG22 281 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 ELAVL4P26378 380 aaKnown RBP12.11□□□□□ -0.47
RNF4-215ENST00000511843 PRKAG1P54619 331 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 MANFP55145 182 aaKnown RBP12.11□□□□□ -0.47
RNF4-215ENST00000511843 ABCE1P61221 599 aaKnown RBP12.11□□□□□ -0.47
RNF4-215ENST00000511843 GAB1Q13480 694 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 ATP6AP1LQ52LC2 224 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 IL23RQ5VWK5 629 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 TMEM81Q6P7N7 255 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 MCEMP1Q8IX19 187 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 KRTCAP2Q8N6L1 136 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 FNDC5Q8NAU1 212 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 PIK3R3Q92569 461 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 TUBGCP3Q96CW5 907 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 TMCO6Q96DC7 493 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 SORT1Q99523 831 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 TIMP4Q99727 224 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 RTN4RQ9BZR6 473 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 SSU72Q9NP77 194 aaKnown RBP12.11□□□□□ -0.47
RNF4-215ENST00000511843 Q9UFV3 132 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 WIF1Q9Y5W5 379 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 LRBAP50851 2863 aa12.11□□□□□ -0.47
RNF4-215ENST00000511843 MED12LQ86YW9 2145 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 APCP25054 2843 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 SCAMP2O15127 329 aaKnown RBP12.1□□□□□ -0.47
RNF4-215ENST00000511843 TM9SF1O15321 606 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 BIRC5O15392 142 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 TBX19O60806 448 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 ABCB7O75027 752 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 IGKV1D-16P01601 117 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 LAMP1P11279 417 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 COX6B1P14854 86 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 BMP7P18075 431 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 GRK2P25098 689 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 CHRNB4P30926 498 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 GABRA3P34903 492 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 HPCAL1P37235 193 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 ASMTP46597 345 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 PNLIPRP2P54317 469 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 STX5Q13190 355 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 SNTA1Q13424 505 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 EFR3AQ14156 821 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 PLXDC2Q6UX71 529 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 SEM1Q6ZVN7 128 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 ACAD11Q709F0 780 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 LIX1LQ8IVB5 337 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 NUP43Q8NFH3 380 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 ZFP28Q8NHY6 868 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 MGARPQ8TDB4 240 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 ZBED6CLQ96FA7 236 aaPredicted RBP12.1□□□□□ -0.47
RNF4-215ENST00000511843 PGM2Q96G03 612 aa12.1□□□□□ -0.47
RNF4-215ENST00000511843 RMND5BQ96G75 393 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms