RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 TMEM211Q6ICI0 200 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 WDR53Q7Z5U6 358 aaPredicted RBP14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 KRTCAP2Q8N6L1 136 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 OR5M9Q8NGP3 310 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 OR1J4Q8NGS1 313 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 CEP70Q8NHQ1 597 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 NEIL3Q8TAT5 605 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 ARL8AQ96BM9 186 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 SARAFQ96BY9 339 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 GIMAP5Q96F15 307 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 ZNF597Q96LX8 424 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 TP63Q9H3D4 680 aaPredicted RBP14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 DDX18Q9NVP1 670 aaKnown RBP14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 ASIC5Q9NY37 505 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 SPRR3Q9UBC9 169 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 ACAD8Q9UKU7 415 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 C15orf41Q9Y2V0 281 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 NCKAP5O14513 1909 aa14.74□□□□□ -0.05
PDLIM5-216ENST00000511767 UNC79Q9P2D8 2635 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 A0A1W2PRB8 838 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 TTC36A6NLP5 189 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 BCKDKO14874 412 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 SCAMP2O15127 329 aaKnown RBP14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 FADS1O60427 444 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 CBR3O75828 277 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 EFNA1P20827 205 aaPredicted RBP14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 PRPS1L1P21108 318 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 GDF1P27539 372 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 PTPN6P29350 595 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 GABRA3P34903 492 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 RPL3P39023 403 aaKnown RBP14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 MASP1P48740 699 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 GAS1P54826 345 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 C21orf58P58505 322 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 HSPB3Q12988 150 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 PDCD2Q16342 344 aaPredicted RBP14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 RTL6Q6ICC9 239 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 ANGPTL8Q6UXH0 198 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 EID3Q8N140 333 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 RPRMLQ8N4K4 120 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 NATD1Q8N6N6 113 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 NUP43Q8NFH3 380 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 ZFP28Q8NHY6 868 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 EFHD2Q96C19 240 aaPredicted RBP14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 C16orf58Q96GQ5 468 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 TIMP4Q99727 224 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 SLC6A15Q9H2J7 730 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 GALNT9Q9HCQ5 603 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 THAP1Q9NVV9 213 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 B4GALT7Q9UBV7 327 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 CBLCQ9ULV8 474 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 OR10H1Q9Y4A9 318 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 MED12Q93074 2177 aa14.73□□□□□ -0.05
PDLIM5-216ENST00000511767 GXYLT2A0PJZ3 443 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 PRAMEF25A6NGN4 478 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 SNPHO15079 494 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 EMC8O43402 210 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 SNNO75324 88 aaPredicted RBP14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 NKX2-2O95096 273 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 IL33O95760 270 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 CYP4B1P13584 511 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 DDX5P17844 614 aaKnown RBP14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 ELAVL4P26378 380 aaKnown RBP14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 ACVR2AP27037 513 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 GPC1P35052 558 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 TRPC1P48995 793 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 PRKAG1P54619 331 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 DIO3P55073 304 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 PMPCAQ10713 525 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 ZNF155Q12901 538 aaPredicted RBP14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 MAD2L1Q13257 205 aaPredicted RBP14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 ZNF630Q2M218 657 aaPredicted RBP14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 EIPR1Q53HC9 387 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 EXOSC6Q5RKV6 272 aaKnown RBP14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 AGBL2Q5U5Z8 902 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 ZNF585AQ6P3V2 769 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 KIRREL3Q8IZU9 778 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 PSMA8Q8TAA3 256 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 FAM110BQ8TC76 370 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 MGARPQ8TDB4 240 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 OR5P2Q8WZ92 322 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 PPP1R36Q96LQ0 422 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 PRPF18Q99633 342 aaKnown RBP14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 OSBPL11Q9BXB4 747 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 EXO5Q9H790 373 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 C3orf14Q9HBI5 128 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 SIRT3Q9NTG7 399 aaPredicted RBP14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 PCDHGB3Q9Y5G1 929 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 KLF2Q9Y5W3 355 aaPredicted RBP14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 CELSR2Q9HCU4 2923 aa14.72□□□□□ -0.05
PDLIM5-216ENST00000511767 EXPH5Q8NEV8 1989 aa14.71□□□□□ -0.05
PDLIM5-216ENST00000511767 ITPR2Q14571 2701 aa14.71□□□□□ -0.05
PDLIM5-216ENST00000511767 HOXD4P09016 255 aaPredicted RBP14.71□□□□□ -0.05
PDLIM5-216ENST00000511767 GRNP28799 593 aaKnown RBP14.71□□□□□ -0.05
PDLIM5-216ENST00000511767 KRT20P35900 424 aa14.71□□□□□ -0.05
PDLIM5-216ENST00000511767 HPCAL1P37235 193 aa14.71□□□□□ -0.05
PDLIM5-216ENST00000511767 DCTP40126 519 aa14.71□□□□□ -0.05
PDLIM5-216ENST00000511767 MRPS22P82650 360 aaKnown RBP14.71□□□□□ -0.05
PDLIM5-216ENST00000511767 DECR1Q16698 335 aa14.71□□□□□ -0.05
PDLIM5-216ENST00000511767 WLSQ5T9L3 541 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms