RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 SDCCAG3Q96C92 435 aa9.45□□□□□ -0.9
PFDN1-203ENST00000510217 C11orf24Q96F05 449 aaPredicted RBP9.45□□□□□ -0.9
PFDN1-203ENST00000510217 CNRIP1Q96F85 164 aaPredicted RBP9.45□□□□□ -0.9
PFDN1-203ENST00000510217 APIPQ96GX9 242 aa9.45□□□□□ -0.9
PFDN1-203ENST00000510217 ZNF681Q96N22 645 aa9.45□□□□□ -0.9
PFDN1-203ENST00000510217 FAIM2Q9BWQ8 316 aa9.45□□□□□ -0.9
PFDN1-203ENST00000510217 EBPLQ9BY08 206 aa9.45□□□□□ -0.9
PFDN1-203ENST00000510217 ITPAQ9BY32 194 aa9.45□□□□□ -0.9
PFDN1-203ENST00000510217 TRIM8Q9BZR9 551 aa9.45□□□□□ -0.9
PFDN1-203ENST00000510217 BRINP2Q9C0B6 783 aa9.45□□□□□ -0.9
PFDN1-203ENST00000510217 NXF5Q9H1B4 397 aaKnown RBP9.45□□□□□ -0.9
PFDN1-203ENST00000510217 ZNF385DQ9H6B1 395 aa9.45□□□□□ -0.9
PFDN1-203ENST00000510217 MID1IP1Q9NPA3 183 aa9.45□□□□□ -0.9
PFDN1-203ENST00000510217 ZFP64Q9NPA5 681 aa9.45□□□□□ -0.9
PFDN1-203ENST00000510217 PNPLA3Q9NST1 481 aa9.45□□□□□ -0.9
PFDN1-203ENST00000510217 CNIH4Q9P003 139 aa9.45□□□□□ -0.9
PFDN1-203ENST00000510217 SPRR3Q9UBC9 169 aa9.45□□□□□ -0.9
PFDN1-203ENST00000510217 TNFRSF10DQ9UBN6 386 aa9.45□□□□□ -0.9
PFDN1-203ENST00000510217 BOKQ9UMX3 212 aaPredicted RBP9.45□□□□□ -0.9
PFDN1-203ENST00000510217 TIMM22Q9Y584 194 aa9.45□□□□□ -0.9
PFDN1-203ENST00000510217 NPFFR2Q9Y5X5 522 aa9.45□□□□□ -0.9
PFDN1-203ENST00000510217 SERTM1A2A2V5 107 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 ANKRD33BA6NCL7 494 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 TRPC5OSA6NMA1 111 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 BCKDKO14874 412 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 SUSD5O60279 629 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 TRIM3O75382 744 aaPredicted RBP9.44□□□□□ -0.9
PFDN1-203ENST00000510217 ULK1O75385 1050 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 CBX7O95931 251 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 SNRPB2P08579 225 aaKnown RBP9.44□□□□□ -0.9
PFDN1-203ENST00000510217 IL3P08700 152 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 COX6B1P14854 86 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 PCSK2P16519 638 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 CSNK2A2P19784 350 aaPredicted RBP9.44□□□□□ -0.9
PFDN1-203ENST00000510217 NCF2P19878 526 aaPredicted RBP9.44□□□□□ -0.9
PFDN1-203ENST00000510217 ABCD3P28288 659 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 TIA1P31483 386 aaKnown RBP eCLIP9.44□□□□□ -0.9
PFDN1-203ENST00000510217 TMED10P49755 219 aaKnown RBP9.44□□□□□ -0.9
PFDN1-203ENST00000510217 SESN3P58005 492 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 MAP4K2Q12851 820 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 SLC9B1Q4ZJI4 515 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 SPIN4Q56A73 249 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 ZNF628Q5EBL2 1059 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 HLA-DQA1Q5Y7H0 255 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 LURAP1LQ8IV03 231 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 PRR22Q8IZ63 422 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 CCNYL1Q8N7R7 359 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 ACBD4Q8NC06 268 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 ADCY4Q8NFM4 1077 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 OR5M9Q8NGP3 310 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 RP9Q8TA86 221 aaKnown RBP9.44□□□□□ -0.9
PFDN1-203ENST00000510217 SPPL2AQ8TCT8 520 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 NRG4Q8WWG1 115 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 CTHRC1Q96CG8 243 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 MAELQ96JY0 434 aaKnown RBP9.44□□□□□ -0.9
PFDN1-203ENST00000510217 ZNF597Q96LX8 424 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 ZNF184Q99676 751 aaPredicted RBP9.44□□□□□ -0.9
PFDN1-203ENST00000510217 DOHHQ9BU89 302 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 TNFRSF12AQ9NP84 129 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 BCAP29Q9UHQ4 241 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 UTS2RQ9UKP6 389 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 DLGAP4Q9Y2H0 992 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 FAM215AQ9Y5M1 114 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 DNAJC13O75165 2243 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 PCNX1Q96RV3 2341 aa9.44□□□□□ -0.9
PFDN1-203ENST00000510217 HCFC1P51610 2035 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 TRGV5A0A0B4J1U4 118 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 GNG14A0A1W2PPG7 69 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 FIGNL2A6NMB9 653 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 E9PBE3 544 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 HCN1O60741 890 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 KIR3DL1P43629 444 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 MAN2A2P49641 1150 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 EMDP50402 254 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 NAGLUP54802 743 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 NRG3P56975 720 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 NUP107P57740 925 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 SLC25A3Q00325 362 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 ACSM2AQ08AH3 577 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 SLC10A1Q14973 349 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 GXYLT1Q4G148 440 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 TRMT12Q53H54 448 aaKnown RBP9.43□□□□□ -0.9
PFDN1-203ENST00000510217 ARL13AQ5H913 290 aaPredicted RBP9.43□□□□□ -0.9
PFDN1-203ENST00000510217 TBCELQ5QJ74 424 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 FNDC7Q5VTL7 733 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 ACSM2BQ68CK6 577 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 RTL6Q6ICC9 239 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 TMEM211Q6ICI0 200 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 GALNT18Q6P9A2 607 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 SCIMPQ6UWF3 145 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 DHDDSQ86SQ9 333 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 POU5F2Q8N7G0 328 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 OR52R1Q8NGF1 315 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 ZNF675Q8TD23 568 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 C16orf78Q8WTQ4 265 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 CA5BP1Q8WTZ4 195 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 DIO2Q92813 273 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 EXOSC8Q96B26 276 aaKnown RBP9.43□□□□□ -0.9
PFDN1-203ENST00000510217 NTNG2Q96CW9 530 aa9.43□□□□□ -0.9
PFDN1-203ENST00000510217 JSRP1Q96MG2 331 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms