RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 CDSNQ15517 529 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 CPTPQ5TA50 214 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 TMEM211Q6ICI0 200 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 WDR53Q7Z5U6 358 aaPredicted RBP14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 KRTCAP2Q8N6L1 136 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 OR5M9Q8NGP3 310 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 OR1J4Q8NGS1 313 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 CEP70Q8NHQ1 597 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 NEIL3Q8TAT5 605 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 ARL8AQ96BM9 186 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 SARAFQ96BY9 339 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 GIMAP5Q96F15 307 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 ZNF597Q96LX8 424 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 TP63Q9H3D4 680 aaPredicted RBP14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 DDX18Q9NVP1 670 aaKnown RBP14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 ASIC5Q9NY37 505 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 SPRR3Q9UBC9 169 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 ACAD8Q9UKU7 415 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 C15orf41Q9Y2V0 281 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 NCKAP5O14513 1909 aa14.74□□□□□ -0.05
PDLIM5-212ENST00000509333 UNC79Q9P2D8 2635 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 A0A1W2PRB8 838 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 TTC36A6NLP5 189 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 BCKDKO14874 412 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 SCAMP2O15127 329 aaKnown RBP14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 FADS1O60427 444 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 CBR3O75828 277 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 EFNA1P20827 205 aaPredicted RBP14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 PRPS1L1P21108 318 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 GDF1P27539 372 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 PTPN6P29350 595 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 GABRA3P34903 492 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 RPL3P39023 403 aaKnown RBP14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 MASP1P48740 699 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 GAS1P54826 345 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 C21orf58P58505 322 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 HSPB3Q12988 150 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 PDCD2Q16342 344 aaPredicted RBP14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 RTL6Q6ICC9 239 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 ANGPTL8Q6UXH0 198 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 EID3Q8N140 333 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 RPRMLQ8N4K4 120 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 NATD1Q8N6N6 113 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 NUP43Q8NFH3 380 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 ZFP28Q8NHY6 868 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 EFHD2Q96C19 240 aaPredicted RBP14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 C16orf58Q96GQ5 468 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 TIMP4Q99727 224 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 SLC6A15Q9H2J7 730 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 GALNT9Q9HCQ5 603 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 THAP1Q9NVV9 213 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 B4GALT7Q9UBV7 327 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 CBLCQ9ULV8 474 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 OR10H1Q9Y4A9 318 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 MED12Q93074 2177 aa14.73□□□□□ -0.05
PDLIM5-212ENST00000509333 GXYLT2A0PJZ3 443 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 PRAMEF25A6NGN4 478 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 SNPHO15079 494 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 EMC8O43402 210 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 SNNO75324 88 aaPredicted RBP14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 NKX2-2O95096 273 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 IL33O95760 270 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 CYP4B1P13584 511 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 DDX5P17844 614 aaKnown RBP14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 ELAVL4P26378 380 aaKnown RBP14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 ACVR2AP27037 513 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 GPC1P35052 558 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 TRPC1P48995 793 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 PRKAG1P54619 331 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 DIO3P55073 304 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 PMPCAQ10713 525 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 ZNF155Q12901 538 aaPredicted RBP14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 MAD2L1Q13257 205 aaPredicted RBP14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 ZNF630Q2M218 657 aaPredicted RBP14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 EIPR1Q53HC9 387 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 EXOSC6Q5RKV6 272 aaKnown RBP14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 AGBL2Q5U5Z8 902 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 ZNF585AQ6P3V2 769 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 KIRREL3Q8IZU9 778 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 PSMA8Q8TAA3 256 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 FAM110BQ8TC76 370 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 MGARPQ8TDB4 240 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 OR5P2Q8WZ92 322 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 PPP1R36Q96LQ0 422 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 PRPF18Q99633 342 aaKnown RBP14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 OSBPL11Q9BXB4 747 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 EXO5Q9H790 373 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 C3orf14Q9HBI5 128 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 SIRT3Q9NTG7 399 aaPredicted RBP14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 PCDHGB3Q9Y5G1 929 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 KLF2Q9Y5W3 355 aaPredicted RBP14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 CELSR2Q9HCU4 2923 aa14.72□□□□□ -0.05
PDLIM5-212ENST00000509333 EXPH5Q8NEV8 1989 aa14.71□□□□□ -0.05
PDLIM5-212ENST00000509333 ITPR2Q14571 2701 aa14.71□□□□□ -0.05
PDLIM5-212ENST00000509333 HOXD4P09016 255 aaPredicted RBP14.71□□□□□ -0.05
PDLIM5-212ENST00000509333 GRNP28799 593 aaKnown RBP14.71□□□□□ -0.05
PDLIM5-212ENST00000509333 KRT20P35900 424 aa14.71□□□□□ -0.05
PDLIM5-212ENST00000509333 HPCAL1P37235 193 aa14.71□□□□□ -0.05
PDLIM5-212ENST00000509333 DCTP40126 519 aa14.71□□□□□ -0.05
PDLIM5-212ENST00000509333 MRPS22P82650 360 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms