RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 UBQLNLQ8IYU4 475 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 TEX9Q8N6V9 391 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 FADS6Q8N9I5 356 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 L3MBTL4Q8NA19 623 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 ADCY4Q8NFM4 1077 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 OR6K3Q8NGY3 331 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 FNDC9Q8TBE3 224 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 TMBIM1Q969X1 311 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 BTBD9Q96Q07 612 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 SERPINI1Q99574 410 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 BRINP2Q9C0B6 783 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 AMBRA1Q9C0C7 1298 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 DDX47Q9H0S4 455 aaKnown RBP8.43□□□□□ -1.06
NEDD9-211ENST00000508546 SLCO5A1Q9H2Y9 848 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 ALG9Q9H6U8 611 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 NMRAL1Q9HBL8 299 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 FANCFQ9NPI8 374 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 WHRNQ9P202 907 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 RNF14Q9UBS8 474 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.43□□□□□ -1.06
NEDD9-211ENST00000508546 CDC42EP3Q9UKI2 254 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 GPR55Q9Y2T6 319 aaPredicted RBP8.43□□□□□ -1.06
NEDD9-211ENST00000508546 V9GYY5 206 aaPredicted RBP8.43□□□□□ -1.06
NEDD9-211ENST00000508546 PRKDCP78527 4128 aaKnown RBP8.43□□□□□ -1.06
NEDD9-211ENST00000508546 C1orf226A1L170 272 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 SUPT3HB4E1H0 165 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 H0YC42 278 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 DYNC1I1O14576 645 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 SUPT3HO75486 399 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 PIAS1O75925 651 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 SOD3P08294 240 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 DANCRP0C864 163 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 CT45A8P0DMV1 189 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 CT45A9P0DMV2 189 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 MTHFD2P13995 350 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 CSNK2A2P19784 350 aaPredicted RBP8.42□□□□□ -1.06
NEDD9-211ENST00000508546 TCEA1P23193 301 aaKnown RBP8.42□□□□□ -1.06
NEDD9-211ENST00000508546 ACVR1BP36896 505 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 PAFAH1B1P43034 410 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 NEK2P51955 445 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 PNLIPRP2P54317 469 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 TPD52P55327 224 aaPredicted RBP8.42□□□□□ -1.06
NEDD9-211ENST00000508546 GPX6P59796 221 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 RPS3AP61247 264 aaKnown RBP8.42□□□□□ -1.06
NEDD9-211ENST00000508546 DLG1Q12959 904 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 PDIA2Q13087 525 aaKnown RBP8.42□□□□□ -1.06
NEDD9-211ENST00000508546 GANABQ14697 944 aaKnown RBP8.42□□□□□ -1.06
NEDD9-211ENST00000508546 FASTKD3Q14CZ7 662 aaKnown RBP8.42□□□□□ -1.06
NEDD9-211ENST00000508546 CPSF6Q16630 551 aaKnown RBP eCLIP8.42□□□□□ -1.06
NEDD9-211ENST00000508546 EXOC3L2Q2M3D2 409 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 TRMT12Q53H54 448 aaKnown RBP8.42□□□□□ -1.06
NEDD9-211ENST00000508546 CT45A2Q5DJT8 189 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 SLC48A1Q6P1K1 146 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 BHLHB9Q6PI77 547 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 DNAJC14Q6Y2X3 702 aaPredicted RBP8.42□□□□□ -1.06
NEDD9-211ENST00000508546 ZNF572Q7Z3I7 529 aaPredicted RBP8.42□□□□□ -1.06
NEDD9-211ENST00000508546 CREG2Q8IUH2 290 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 METTL25Q8N6Q8 603 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 OR4K17Q8NGC6 315 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 OR52R1Q8NGF1 315 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 LILRB1Q8NHL6 650 aaPredicted RBP8.42□□□□□ -1.06
NEDD9-211ENST00000508546 TRPC4APQ8TEL6 797 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 ROBO4Q8WZ75 1007 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 GFM2Q969S9 779 aaKnown RBP8.42□□□□□ -1.06
NEDD9-211ENST00000508546 FBXW5Q969U6 566 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 ADOQ96SZ5 270 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 RBBP8Q99708 897 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 CPNE1Q99829 537 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 STMN4Q9H169 189 aaPredicted RBP8.42□□□□□ -1.06
NEDD9-211ENST00000508546 SAYSD1Q9NPB0 183 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 TMEM160Q9NX00 188 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 TXNDC16Q9P2K2 825 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 GPR52Q9Y2T5 361 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 EMC9Q9Y3B6 208 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 ZNF337Q9Y3M9 751 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 ANGPTL3Q9Y5C1 460 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 PCDHA9Q9Y5H5 950 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 DYSFO75923 2080 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 HEATR1Q9H583 2144 aaKnown RBP8.42□□□□□ -1.06
NEDD9-211ENST00000508546 TENM1Q9UKZ4 2725 aa8.42□□□□□ -1.06
NEDD9-211ENST00000508546 CCDC189A1A4V9 331 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 OR2M5A3KFT3 312 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 SYCE1LA8MT33 242 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 CXorf49A8MYA2 514 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-211ENST00000508546 TP73O15350 636 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 SEC14L5O43304 696 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 GUCY1B2O75343 617 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 BCAS2O75934 225 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-211ENST00000508546 AQP8O94778 261 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 IGHV4-39P01824 125 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 KLK1P06870 262 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 HK1P19367 917 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 PSMB1P20618 241 aaKnown RBP8.41□□□□□ -1.06
NEDD9-211ENST00000508546 FEN1P39748 380 aaKnown RBP8.41□□□□□ -1.06
NEDD9-211ENST00000508546 GP5P40197 560 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 CLDN20P56880 219 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 MRPS22P82650 360 aaKnown RBP8.41□□□□□ -1.06
NEDD9-211ENST00000508546 SLMAPQ14BN4 828 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 ERCC6LQ2NKX8 1250 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 GLYR1Q49A26 553 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms