RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 ABCA4P78363 2273 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 MTORP42345 2549 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 SH3D21A4FU49 640 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 C17orf51A8MQB3 221 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 B4DXG7 233 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 GOLGA8RI6L899 631 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 PLOD2O00469 737 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 SCO2O43819 266 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 GOSR1O95249 250 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 ATE1O95260 518 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 ZNF708P17019 499 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 PNLIPRP2P54317 469 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 PRKAA2P54646 552 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 GAS1P54826 345 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 PKNOX1P55347 436 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 CLDN18P56856 261 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 PSPHP78330 225 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 LCP2Q13094 533 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 KEAP1Q14145 624 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 GLE1Q53GS7 698 aaKnown RBP10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 LCA5Q86VQ0 697 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 GRAMD2AQ8IUY3 354 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 SLC22A9Q8IVM8 553 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 SLC44A2Q8IWA5 706 aaPredicted RBP10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 OR4K17Q8NGC6 315 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 OR4N2Q8NGD1 307 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 CDC26Q8NHZ8 85 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 L3HYPDHQ96EM0 354 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 DTNBP1Q96EV8 351 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 UCN2Q96RP3 112 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 ACBD3Q9H3P7 528 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 PIGMQ9H3S5 423 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 PLEKHF2Q9H8W4 249 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 NFU1Q9UMS0 254 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 RPH3AQ9Y2J0 694 aaPredicted RBP10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 OR10H1Q9Y4A9 318 aa10.46□□□□□ -0.73
HMGCS1-204ENST00000507293 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 HCRTR2O43614 444 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 PLOD3O60568 738 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 COQ9O75208 318 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 TNFSF13O75888 250 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 HRGP04196 525 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 ANXA4P09525 319 aaPredicted RBP10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 CHMP24386 653 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 DPP4P27487 766 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 EVI2BP34910 448 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 CPOXP36551 454 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 FOXA1P55317 472 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 B3GALT5-AS1P59052 145 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 ADAM8P78325 824 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 ZNF763Q0D2J5 394 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 PRSS53Q2L4Q9 553 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 DEFB113Q30KQ7 82 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 KRTAP21-3Q3LHN1 58 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 SH2D4BQ5SQS7 431 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 GALNT18Q6P9A2 607 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 P4HA3Q7Z4N8 544 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 C11orf24Q96F05 449 aaPredicted RBP10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 DACH2Q96NX9 599 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 BBS4Q96RK4 519 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 SHCBP1LQ9BZQ2 653 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 STMN4Q9H169 189 aaPredicted RBP10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 GSTO2Q9H4Y5 243 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 MID1IP1Q9NPA3 183 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 DLL4Q9NR61 685 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 TAS2R9Q9NYW1 312 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 FLRT3Q9NZU0 649 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 PPP4R1LQ9P1A2 415 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 PACSIN3Q9UKS6 424 aa10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 MRPS18CQ9Y3D5 142 aaKnown RBP10.45□□□□□ -0.74
HMGCS1-204ENST00000507293 A0A1W2PNV4 684 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 A0A1W2PPR1 153 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 CCDC151A5D8V7 595 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 MYO1GB0I1T2 1018 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 RIPK2O43353 540 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 ZIC3O60481 467 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 TGM6O95932 706 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 JUNP05412 331 aaKnown RBP10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 PYGBP11216 843 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 DDCP20711 480 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 MPIP34949 423 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 MC3RP41968 323 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 GSTM5P46439 218 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 NCBP2P52298 156 aaKnown RBP eCLIP10.44□□□□□ -0.741e-7■□□□□ 11
HMGCS1-204ENST00000507293 DIO3P55073 304 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 DSCR4P56555 118 aaPredicted RBP10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 EEF1A1P68104 462 aaKnown RBP10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 MRPS22P82650 360 aaKnown RBP10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 PSG6Q00889 435 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 C2orf80Q0P641 193 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 STX5Q13190 355 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 GAB1Q13480 694 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 SPDYAQ5MJ70 313 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 EEF1A1P5Q5VTE0 462 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 TMEM107Q6UX40 140 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 TRMT10CQ7L0Y3 403 aaKnown RBP10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 CHMP1BQ7LBR1 199 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 UBQLNLQ8IYU4 475 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 CCNYL1Q8N7R7 359 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 FADS6Q8N9I5 356 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms