RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 PAOXQ6QHF9 649 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 FAM111BQ6SJ93 734 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 LYPD8Q6UX82 237 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 C6orf120Q7Z4R8 191 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 PACS2Q86VP3 889 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 SLC22A16Q86VW1 577 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 ANKRD46Q86W74 232 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 FUNDC1Q8IVP5 155 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 MMP21Q8N119 569 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 EID3Q8N140 333 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 RBMXL3Q8N7X1 1067 aaKnown RBP7.8□□□□□ -1.16
PDGFC-205ENST00000506880 ZFP62Q8NB50 900 aaPredicted RBP7.8□□□□□ -1.16
PDGFC-205ENST00000506880 PSD4Q8NDX1 1056 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 ADCY4Q8NFM4 1077 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 OR8J3Q8NGG0 315 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 OR52N2Q8NGI0 321 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 RFWD2Q8NHY2 731 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 SPPL2AQ8TCT8 520 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 KAT2AQ92830 837 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 CIDECQ96AQ7 238 aaPredicted RBP7.8□□□□□ -1.16
PDGFC-205ENST00000506880 TMEM41AQ96HV5 264 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 SLC35G5Q96KT7 338 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 TRNT1Q96Q11 434 aaKnown RBP7.8□□□□□ -1.16
PDGFC-205ENST00000506880 LRRC37BQ96QE4 947 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 HOPXQ9BPY8 73 aaPredicted RBP7.8□□□□□ -1.16
PDGFC-205ENST00000506880 SLC35A5Q9BS91 424 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 SAP130Q9H0E3 1048 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.8□□□□□ -1.16
PDGFC-205ENST00000506880 NXF5Q9H1B4 397 aaKnown RBP7.8□□□□□ -1.16
PDGFC-205ENST00000506880 TMEM38AQ9H6F2 299 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 ARMC7Q9H6L4 198 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 SLC52A3Q9NQ40 469 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 SERHLQ9NQF3 203 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 UBQLN4Q9NRR5 601 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 CCDC167Q9P0B6 97 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 B4GALT7Q9UBV7 327 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 GIMAP2Q9UG22 337 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 EML6Q6ZMW3 1958 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 IGLV3-32A0A0A0MS00 114 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 A6NL46 340 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 B8ZZF3 427 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 ALG1L2C9J202 215 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 SUV39H1O43463 412 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 HNRNPCL1O60812 293 aaKnown RBP7.79□□□□□ -1.16
PDGFC-205ENST00000506880 STX11O75558 287 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 RASAL1O95294 804 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 HOXD4P09016 255 aaPredicted RBP7.79□□□□□ -1.16
PDGFC-205ENST00000506880 HOXB6P17509 224 aaKnown RBP7.79□□□□□ -1.16
PDGFC-205ENST00000506880 GPX2P18283 190 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 ATP6V1C1P21283 382 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 TBXA2RP21731 343 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 MATN1P21941 496 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 GCKP35557 465 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 SOX3P41225 446 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 CDK9P50750 372 aaKnown RBP7.79□□□□□ -1.16
PDGFC-205ENST00000506880 MAP2K6P52564 334 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 FOXL2P58012 376 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 PHC1P78364 1004 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 MRPS35P82673 323 aaKnown RBP7.79□□□□□ -1.16
PDGFC-205ENST00000506880 OC90Q02509 493 aaPredicted RBP7.79□□□□□ -1.16
PDGFC-205ENST00000506880 DUSP2Q05923 314 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 C19orf57Q0VDD7 668 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 KLF10Q13118 480 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 ELOAQ14241 798 aaKnown RBP7.79□□□□□ -1.16
PDGFC-205ENST00000506880 SF3B4Q15427 424 aaKnown RBP eCLIP7.79□□□□□ -1.16
PDGFC-205ENST00000506880 LTB4RQ15722 352 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 TRMT5Q32P41 509 aaKnown RBP7.79□□□□□ -1.16
PDGFC-205ENST00000506880 TMEM198Q66K66 360 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 CGB2Q6NT52 195 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 ERICH5Q6P6B1 374 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 PCSK4Q6UW60 755 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 FAM180AQ6UWF9 173 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 DGAT2L6Q6ZPD8 337 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 LRRC74BQ6ZQY2 392 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 SERPINA11Q86U17 422 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 SLC44A2Q8IWA5 706 aaPredicted RBP7.79□□□□□ -1.16
PDGFC-205ENST00000506880 ARHGAP24Q8N264 748 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 KIF2BQ8N4N8 673 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 COX18Q8N8Q8 333 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 ZFP90Q8TF47 636 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 THAP3Q8WTV1 239 aaPredicted RBP7.79□□□□□ -1.16
PDGFC-205ENST00000506880 RASSF5Q8WWW0 418 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 OMA1Q96E52 524 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 TEX37Q96LM6 180 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 GAL3ST4Q96RP7 486 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 CCT8L2Q96SF2 557 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 NPAS2Q99743 824 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 ELAC2Q9BQ52 826 aaKnown RBP7.79□□□□□ -1.16
PDGFC-205ENST00000506880 SPATA5L1Q9BVQ7 753 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 ITPAQ9BY32 194 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 ANGPTL4Q9BY76 406 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 MYLK2Q9H1R3 596 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 CXorf36Q9H7Y0 433 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 EFCAB1Q9HAE3 211 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 TPT1P8Q9HAU6 139 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 IL1RL2Q9HB29 575 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 CACYBPQ9HB71 228 aaKnown RBP7.79□□□□□ -1.16
PDGFC-205ENST00000506880 BCL2L10Q9HD36 194 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 STOML1Q9UBI4 398 aa7.79□□□□□ -1.16
PDGFC-205ENST00000506880 P2RX2Q9UBL9 471 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms