RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 KCNE3Q9Y6H6 103 aa11.83□□□□□ -0.52
TCOF1-210ENST00000506767 TRAV17A0A0B4J275 112 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 GXYLT2A0PJZ3 443 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 OR6C70A6NIJ9 312 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 DUXAA6NLW8 204 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 CLIC1O00299 241 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 ASNA1O43681 348 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 UNC5CO95185 931 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 NPPAP01160 153 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 TMED10P49755 219 aaKnown RBP11.82□□□□□ -0.52
TCOF1-210ENST00000506767 PNLIPRP2P54317 469 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 RPS26P62854 115 aaKnown RBP11.82□□□□□ -0.52
TCOF1-210ENST00000506767 MRPS22P82650 360 aaKnown RBP11.82□□□□□ -0.52
TCOF1-210ENST00000506767 OC90Q02509 493 aaPredicted RBP11.82□□□□□ -0.52
TCOF1-210ENST00000506767 PLCXD2Q0VAA5 305 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 RUNDC3AQ59EK9 446 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 COX20Q5RI15 118 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 REP15Q6BDI9 236 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 RTL4Q6ZR62 310 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 NUP54Q7Z3B4 507 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 MDGA2Q7Z553 956 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 DHDDSQ86SQ9 333 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 RNF130Q86XS8 419 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 FITM2Q8N6M3 262 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 HORMAD2Q8N7B1 307 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 POU5F2Q8N7G0 328 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 BCORP1Q8N888 145 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 OR52N2Q8NGI0 321 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 OR5D16Q8NGK9 328 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 FBXO30Q8TB52 745 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 PAQR8Q8TEZ7 354 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 DIO2Q92813 273 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 CDS1Q92903 461 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 HGDQ93099 445 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 NTNG2Q96CW9 530 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 OTUB1Q96FW1 271 aaPredicted RBP11.82□□□□□ -0.52
TCOF1-210ENST00000506767 SCMH1Q96GD3 660 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 AURKBQ96GD4 344 aaPredicted RBP11.82□□□□□ -0.52
TCOF1-210ENST00000506767 BTBD2Q9BX70 525 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.82□□□□□ -0.52
TCOF1-210ENST00000506767 OR51I1Q9H343 314 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 B3GNT3Q9Y2A9 372 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 OR10H1Q9Y4A9 318 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 PCDHGB3Q9Y5G1 929 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 CHCHD2Q9Y6H1 151 aaPredicted RBP11.82□□□□□ -0.52
TCOF1-210ENST00000506767 ATMQ13315 3056 aa11.82□□□□□ -0.52
TCOF1-210ENST00000506767 FXYD1O00168 92 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 HMGN4O00479 90 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 MRASO14807 208 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 ABCB7O75027 752 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 UGT2B11O75310 529 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 REM1O75628 298 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 SLC25A12O75746 678 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 KCNK2O95069 426 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 IL33O95760 270 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 IGKV1D-16P01601 117 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 SP1P08047 785 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 OR12D1P0DN82 309 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 GPX2P18283 190 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 CASP9P55211 416 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 FBXW4P57775 412 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 NFYCQ13952 458 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 ZNF169Q14929 603 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-210ENST00000506767 DECR1Q16698 335 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.81□□□□□ -0.52
TCOF1-210ENST00000506767 TRMT5Q32P41 509 aaKnown RBP11.81□□□□□ -0.52
TCOF1-210ENST00000506767 PLEKHN1Q494U1 663 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-210ENST00000506767 MMEL1Q495T6 779 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 NADK2Q4G0N4 442 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 AP1ARQ63HQ0 302 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 SLC6A19Q695T7 634 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 DESI1Q6ICB0 168 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 SLC25A25Q6KCM7 469 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 HEPHL1Q6MZM0 1159 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 RPUSD3Q6P087 351 aaKnown RBP11.81□□□□□ -0.52
TCOF1-210ENST00000506767 TNFAIP8L2Q6P589 184 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-210ENST00000506767 TMEM81Q6P7N7 255 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 PSD4Q8NDX1 1056 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 CHDHQ8NE62 594 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-210ENST00000506767 OR10G3Q8NGC4 313 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 SPPL2AQ8TCT8 520 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 RNF138Q8WVD3 245 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 JADE3Q92613 823 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 PNPLA2Q96AD5 504 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 CMTM5Q96DZ9 223 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 RMND5BQ96G75 393 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-210ENST00000506767 ANKRD27Q96NW4 1050 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 COL21A1Q96P44 957 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 SECISBP2Q96T21 854 aaKnown RBP11.81□□□□□ -0.52
TCOF1-210ENST00000506767 CGREF1Q99674 301 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 MFRPQ9BY79 579 aa11.81□□□□□ -0.52
TCOF1-210ENST00000506767 MRTO4Q9UKD2 239 aaKnown RBP11.81□□□□□ -0.52
TCOF1-210ENST00000506767 PRAMEF27A3QJZ7 478 aa11.8□□□□□ -0.52
TCOF1-210ENST00000506767 TP53I11O14683 189 aa11.8□□□□□ -0.52
TCOF1-210ENST00000506767 NME2P1O60361 137 aa11.8□□□□□ -0.52
TCOF1-210ENST00000506767 ZIC2O95409 532 aaPredicted RBP11.8□□□□□ -0.52
TCOF1-210ENST00000506767 AGR2O95994 175 aa11.8□□□□□ -0.52
TCOF1-210ENST00000506767 GUSBP08236 651 aa11.8□□□□□ -0.52
TCOF1-210ENST00000506767 CCL3P10147 92 aa11.8□□□□□ -0.52
TCOF1-210ENST00000506767 BMP2P12643 396 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms