RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 SDHAF2Q9NX18 166 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 PPIL1Q9Y3C6 166 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 M0R3H8 397 aa16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 ATG13O75143 517 aa16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 RGS9O75916 674 aaPredicted RBP16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 DRD2P14416 443 aa16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 SHC2P98077 582 aa16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 SEZ6L2Q6UXD5 910 aa16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 TFAP2EQ6VUC0 442 aa16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 HS6ST3Q8IZP7 471 aa16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 ZNF687Q8N1G0 1237 aa16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 TBC1D19Q8N5T2 526 aa16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 OR6M1Q8NGM8 313 aa16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 GIMAP1Q8WWP7 306 aa16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 MRPS31Q92665 395 aaKnown RBP16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 SLC38A2Q96QD8 506 aa16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 C1QTNF6Q9BXI9 259 aa16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 SLAMF7Q9NQ25 335 aa16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 MIEF1Q9NQG6 463 aa16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 FAM8A1Q9UBU6 413 aa16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 LIPT1Q9Y234 373 aa16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 EXOGQ9Y2C4 368 aaKnown RBP16.08■□□□□ 0.16
SQSTM1-211ENST00000506690 SLC28A2O43868 658 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 EOMESO95936 686 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 IGSF6O95976 241 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 NUP62P37198 522 aaPredicted RBP16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 SPINT3P49223 89 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 RPL6Q02878 288 aaKnown RBP16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 SLBPQ14493 270 aaKnown RBP eCLIP16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 ZDHHC20Q5W0Z9 365 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 FTMTQ8N4E7 242 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 OR2T35Q8NGX2 323 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 WDR34Q96EX3 536 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 TMEM169Q96HH4 297 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 ZNF436Q9C0F3 470 aaPredicted RBP16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 TMEM5Q9Y2B1 443 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 MMP20O60882 483 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 B4GALT2O60909 372 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 H2AFB2P0C5Z0 115 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 LCN1P31025 176 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 AADACL4Q5VUY2 407 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 SMARCD3Q6STE5 483 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 ZNF322Q6U7Q0 402 aaPredicted RBP16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 KLBQ86Z14 1044 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 SIAH3Q8IW03 269 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 TOMM5Q8N4H5 51 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 BEST4Q8NFU0 473 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 C2orf15Q8WU43 125 aaKnown RBP16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 RFKQ969G6 155 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 YIPF5Q969M3 257 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 ECHDC3Q96DC8 303 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 TREX2Q9BQ50 279 aaPredicted RBP16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 TMEM168Q9H0V1 697 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 MED9Q9NWA0 146 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 MARK1Q9P0L2 795 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 PTGFRNQ9P2B2 879 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 CD84Q9UIB8 345 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 POMT2Q9UKY4 750 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 SH2B3Q9UQQ2 575 aa16.07■□□□□ 0.16
SQSTM1-211ENST00000506690 ANAPC1Q9H1A4 1944 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 RNF13O43567 381 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 CATP04040 527 aaKnown RBP16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 HRGP04196 525 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 CCR6P51684 374 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 BTN2A1Q7KYR7 527 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 OVCH2Q7RTZ1 564 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 KANSL1Q7Z3B3 1105 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 CMIPQ8IY22 773 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 HCN3Q9P1Z3 774 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 PPIEQ9UNP9 301 aaKnown RBP16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 RASD1Q9Y272 281 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 PLXND1Q9Y4D7 1925 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 H3BUI4 141 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 ACP5P13686 325 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 FLT3LGP49771 235 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 MAP4K2Q12851 820 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 WASH2PQ6VEQ5 465 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 NLRC3Q7RTR2 1065 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 C6orf120Q7Z4R8 191 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 MEX3DQ86XN8 651 aaKnown RBP16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 OR2AP1Q8NGE2 309 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 OR5P2Q8WZ92 322 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 SGTBQ96EQ0 304 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 EFCAB11Q9BUY7 163 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 JAM3Q9BX67 310 aa16.06■□□□□ 0.16
SQSTM1-211ENST00000506690 PRAMEF27A3QJZ7 478 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 RFXAPO00287 272 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 ZNF593O00488 134 aaPredicted RBP16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 SSNA1O43805 119 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 TOXO94900 526 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 TM4SF4P48230 202 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 SELENOPP49908 381 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 RNF144AP50876 292 aaPredicted RBP16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 BDH1Q02338 343 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 OPCMLQ14982 345 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 RTP2Q5QGT7 225 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 SFXN4Q6P4A7 337 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 CFAP77Q6ZQR2 320 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 PTP4A1Q93096 173 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 PRRC1Q96M27 445 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms