RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 UBQLN3Q9H347 655 aa14.24□□□□□ -0.13
CLDND1-211ENST00000506575 GALNT9Q9HCQ5 603 aa14.24□□□□□ -0.13
CLDND1-211ENST00000506575 Q9N2J8 555 aa14.24□□□□□ -0.13
CLDND1-211ENST00000506575 GIMAP2Q9UG22 337 aa14.24□□□□□ -0.13
CLDND1-211ENST00000506575 MAPRE3Q9UPY8 281 aa14.24□□□□□ -0.13
CLDND1-211ENST00000506575 C2orf72A6NCS6 295 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 SNPHO15079 494 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 TSPAN2O60636 221 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 LYPLA1O75608 230 aaPredicted RBP14.23□□□□□ -0.13
CLDND1-211ENST00000506575 SNUPNO95149 360 aaKnown RBP14.23□□□□□ -0.13
CLDND1-211ENST00000506575 GABRA1P14867 456 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 PTPN6P29350 595 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 CHRNB4P30926 498 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 GCKP35557 465 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 NUP107P57740 925 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 PSG6Q00889 435 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 PDE7AQ13946 482 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 CDSNQ15517 529 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 CYP27C1Q4G0S4 372 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 C6orf136Q5SQH8 315 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 C1orf185Q5T7R7 199 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 SZRD1Q7Z422 152 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 OR10Q1Q8NGQ4 319 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 TUBGCP3Q96CW5 907 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 C1orf50Q9BV19 199 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 C3orf14Q9HBI5 128 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 EQTNQ9NQ60 294 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 MRTO4Q9UKD2 239 aaKnown RBP14.23□□□□□ -0.13
CLDND1-211ENST00000506575 CBLCQ9ULV8 474 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 RNF6Q9Y252 685 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 PKDREJQ9NTG1 2253 aa14.23□□□□□ -0.13
CLDND1-211ENST00000506575 ABCA12Q86UK0 2595 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 TTC36A6NLP5 189 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 CBR3O75828 277 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 PSMG1O95456 288 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 PRPS2P11908 318 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 COX6B1P14854 86 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 GRK2P25098 689 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 PTGDSP41222 190 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 PSMD4P55036 377 aaKnown RBP14.22□□□□□ -0.13
CLDND1-211ENST00000506575 ABCE1P61221 599 aaKnown RBP14.22□□□□□ -0.13
CLDND1-211ENST00000506575 MAD2L1Q13257 205 aaPredicted RBP14.22□□□□□ -0.13
CLDND1-211ENST00000506575 DECR1Q16698 335 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 VPS26BQ4G0F5 336 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 ZNF385BQ569K4 471 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 TNFAIP8L3Q5GJ75 292 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 OR4N2Q8NGD1 307 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 CEP70Q8NHQ1 597 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 C3orf30Q96M34 536 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 PAIP2Q9BPZ3 127 aaKnown RBP14.22□□□□□ -0.13
CLDND1-211ENST00000506575 TTYH2Q9BSA4 534 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 SERHLQ9NQF3 203 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 ACSS1Q9NUB1 689 aaPredicted RBP14.22□□□□□ -0.13
CLDND1-211ENST00000506575 EIF3LQ9Y262 564 aaKnown RBP14.22□□□□□ -0.13
CLDND1-211ENST00000506575 PCDHGB3Q9Y5G1 929 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 FAM215AQ9Y5M1 114 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 WIF1Q9Y5W5 379 aa14.22□□□□□ -0.13
CLDND1-211ENST00000506575 FAM47E-STBD1D6RA91 191 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 SCAMP2O15127 329 aaKnown RBP14.21□□□□□ -0.13
CLDND1-211ENST00000506575 ITM2AO43736 263 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 DHRS4L1P0CG22 281 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 PTGER4P35408 488 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 SLC1A6P48664 564 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 PRKAG1P54619 331 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 GAB1Q13480 694 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 PDCD2Q16342 344 aaPredicted RBP14.21□□□□□ -0.13
CLDND1-211ENST00000506575 EIPR1Q53HC9 387 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 WIPI1Q5MNZ9 446 aaPredicted RBP14.21□□□□□ -0.13
CLDND1-211ENST00000506575 HHATQ5VTY9 493 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 IL23RQ5VWK5 629 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 WDR53Q7Z5U6 358 aaPredicted RBP14.21□□□□□ -0.13
CLDND1-211ENST00000506575 PLCZ1Q86YW0 608 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 CCDC71Q8IV32 467 aaPredicted RBP14.21□□□□□ -0.13
CLDND1-211ENST00000506575 PM20D2Q8IYS1 436 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 ULK2Q8IYT8 1036 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 KIRREL3Q8IZU9 778 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 ZNF781Q8N8C0 355 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 ANKRD42Q8N9B4 389 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 FAM83FQ8NEG4 500 aaPredicted RBP14.21□□□□□ -0.13
CLDND1-211ENST00000506575 NUP43Q8NFH3 380 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 NTNG2Q96CW9 530 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 PRPF18Q99633 342 aaKnown RBP14.21□□□□□ -0.13
CLDND1-211ENST00000506575 LMF2Q9BU23 707 aaKnown RBP14.21□□□□□ -0.13
CLDND1-211ENST00000506575 ATAD3AQ9NVI7 634 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 ATP6V1HQ9UI12 483 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.21□□□□□ -0.13
CLDND1-211ENST00000506575 SLC6A5Q9Y345 797 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 RAP2CQ9Y3L5 183 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 ARHGAP21Q5T5U3 1957 aa14.21□□□□□ -0.13
CLDND1-211ENST00000506575 EMC8O43402 210 aa14.2□□□□□ -0.14
CLDND1-211ENST00000506575 KCNH1O95259 989 aa14.2□□□□□ -0.14
CLDND1-211ENST00000506575 SNRPB2P08579 225 aaKnown RBP14.2□□□□□ -0.14
CLDND1-211ENST00000506575 GLI4P10075 376 aa14.2□□□□□ -0.14
CLDND1-211ENST00000506575 CYP4B1P13584 511 aa14.2□□□□□ -0.14
CLDND1-211ENST00000506575 BGNP21810 368 aa14.2□□□□□ -0.14
CLDND1-211ENST00000506575 GABRA3P34903 492 aa14.2□□□□□ -0.14
CLDND1-211ENST00000506575 FRKP42685 505 aaPredicted RBP14.2□□□□□ -0.14
CLDND1-211ENST00000506575 RFX3P48380 749 aa14.2□□□□□ -0.14
CLDND1-211ENST00000506575 CLK3P49761 638 aaKnown RBP14.2□□□□□ -0.14
CLDND1-211ENST00000506575 CRYZQ08257 329 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms