RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 MC3RP41968 323 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 KIR2DL3P43628 341 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 GSTM5P46439 218 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 SRYQ05066 204 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 FOXF2Q12947 444 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 EFR3AQ14156 821 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 IMPG1Q17R60 797 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 ERCC6LQ2NKX8 1250 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 FBXL19-AS1Q494R0 122 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 CFAP157Q5JU67 520 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 TMEM107Q6UX40 140 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 ADGRE4PQ86SQ3 457 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 CNPY4Q8N129 248 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 OR2W6PQ8NHA6 318 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 OR14L1PQ8NHC6 308 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 MBD3L2Q8NHZ7 208 aaPredicted RBP13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 FAM76AQ8TAV0 307 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 RNASE6Q93091 150 aaKnown RBP13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 AMDHD1Q96NU7 426 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 STMN4Q9H169 189 aaPredicted RBP13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 LIME1Q9H400 295 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 TUBB1Q9H4B7 451 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 RRAGDQ9NQL2 400 aaPredicted RBP13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 TAS2R9Q9NYW1 312 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 JKAMPQ9P055 326 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 WBP11Q9Y2W2 641 aaKnown RBP13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 VPS13CQ709C8 3753 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 KIAA1549Q9HCM3 1950 aa13.07□□□□□ -0.32
CDC42SE2-209ENST00000506419 A0A087WV62 115 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 NPIPB8E9PQR5 432 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 H3BQF6 201 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 SEC22BO75396 215 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 CRCPO75575 148 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 RSL1D1O76021 490 aaKnown RBP13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 GRK2P25098 689 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 SRD5A2P31213 254 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 LHX2P50458 406 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 ASCL1P50553 236 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 B3GALT5-AS1P59052 145 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 NAA20P61599 178 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 SF3B4Q15427 424 aaKnown RBP eCLIP13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 LIPMQ5VYY2 423 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 ANKRD26P1Q6NSI1 321 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 ZNF551Q7Z340 670 aaPredicted RBP13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 TMEM200AQ86VY9 491 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 OR2L13Q8N349 312 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 CCDC63Q8NA47 563 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 OR2T11Q8NH01 316 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 UCN2Q96RP3 112 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 ANKZF1Q9H8Y5 726 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 SLC24A3Q9HC58 644 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 DNAJB12Q9NXW2 375 aaKnown RBP13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 MRPS18CQ9Y3D5 142 aaKnown RBP13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 WIF1Q9Y5W5 379 aa13.06□□□□□ -0.32
CDC42SE2-209ENST00000506419 ANKRD17O75179 2603 aaKnown RBP13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 TLDC2A0PJX2 215 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 SLC28A1O00337 649 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 AZIN1O14977 448 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 ZWINTO95229 277 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 TCEA1P23193 301 aaKnown RBP13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 PRPH2P23942 346 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 IL12BP29460 328 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 DNAJA1P31689 397 aaKnown RBP13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 CLDN15P56746 228 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 PCLAFQ15004 111 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 UGT3A2Q3SY77 523 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 CYP27C1Q4G0S4 372 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 RFTN2Q52LD8 501 aaPredicted RBP13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 ZNF385BQ569K4 471 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 SH2D4BQ5SQS7 431 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 SPNS3Q6ZMD2 512 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 FADS6Q8N9I5 356 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 GFM2Q969S9 779 aaKnown RBP13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 FCRL1Q96LA6 429 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 DSN1Q9H410 356 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 PPCSQ9HAB8 311 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 LRTM1Q9HBL6 345 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 MIEF1Q9NQG6 463 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 MED11Q9P086 117 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 BAIAP2L1Q9UHR4 511 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 RPH3AQ9Y2J0 694 aaPredicted RBP13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 OR10H1Q9Y4A9 318 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 AKAP6Q13023 2319 aa13.05□□□□□ -0.32
CDC42SE2-209ENST00000506419 GXYLT2A0PJZ3 443 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 CLCA1A8K7I4 914 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 TRIM13O60858 407 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 RCBTB2O95199 551 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 IL18BPO95998 194 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 IGKV1D-16P01601 117 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 LINC00032P0C843 101 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 TMIGD3P0DMS9 266 aaPredicted RBP13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 DPP4P27487 766 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 ALDH3A1P30838 453 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 KRT20P35900 424 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 MAP3K8P41279 467 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 CLDN18P56856 261 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 ZNF155Q12901 538 aaPredicted RBP13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 ENPP6Q6UWR7 440 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 APOOLQ6UXV4 268 aa13.04□□□□□ -0.32
CDC42SE2-209ENST00000506419 BANPQ8N9N5 519 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms