RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 TRGV8A0A0C4DH27 118 aa15.29■□□□□ 0.04
SNCA-209ENST00000506244 LRRC3CA6NJW4 275 aa15.29■□□□□ 0.04
SNCA-209ENST00000506244 PRRG2O14669 202 aa15.29■□□□□ 0.04
SNCA-209ENST00000506244 POLR3GO15318 223 aaPredicted RBP15.29■□□□□ 0.04
SNCA-209ENST00000506244 TSPAN2O60636 221 aa15.29■□□□□ 0.04
SNCA-209ENST00000506244 DIAPH2O60879 1101 aa15.29■□□□□ 0.04
SNCA-209ENST00000506244 C6orf47O95873 294 aa15.29■□□□□ 0.04
SNCA-209ENST00000506244 ALDOCP09972 364 aaKnown RBP15.29■□□□□ 0.04
SNCA-209ENST00000506244 EFNA1P20827 205 aaPredicted RBP15.29■□□□□ 0.04
SNCA-209ENST00000506244 SOAT1P35610 550 aa15.29■□□□□ 0.04
SNCA-209ENST00000506244 CA7P43166 264 aa15.29■□□□□ 0.04
SNCA-209ENST00000506244 GSTA3Q16772 222 aa15.29■□□□□ 0.04
SNCA-209ENST00000506244 BICRALQ6AI39 1079 aa15.29■□□□□ 0.04
SNCA-209ENST00000506244 MFSD12Q6NUT3 480 aa15.29■□□□□ 0.04
SNCA-209ENST00000506244 Q6ZPB1 254 aaPredicted RBP15.29■□□□□ 0.04
SNCA-209ENST00000506244 ARFGAP2Q8N6H7 521 aa15.29■□□□□ 0.04
SNCA-209ENST00000506244 GLB1L3Q8NCI6 653 aaPredicted RBP15.29■□□□□ 0.04
SNCA-209ENST00000506244 OR52N2Q8NGI0 321 aa15.29■□□□□ 0.04
SNCA-209ENST00000506244 GPR151Q8TDV0 419 aa15.29■□□□□ 0.04
SNCA-209ENST00000506244 SLC9A6Q92581 669 aa15.29■□□□□ 0.04
SNCA-209ENST00000506244 JADE3Q92613 823 aa15.29■□□□□ 0.04
SNCA-209ENST00000506244 HOXB13Q92826 284 aaPredicted RBP15.29■□□□□ 0.04
SNCA-209ENST00000506244 EFHD2Q96C19 240 aaPredicted RBP15.29■□□□□ 0.04
SNCA-209ENST00000506244 PROK2Q9HC23 129 aa15.29■□□□□ 0.04
SNCA-209ENST00000506244 SIRT3Q9NTG7 399 aaPredicted RBP15.29■□□□□ 0.04
SNCA-209ENST00000506244 FAM120CQ9NX05 1096 aaKnown RBP15.29■□□□□ 0.04
SNCA-209ENST00000506244 ABCG2Q9UNQ0 655 aa15.29■□□□□ 0.04
SNCA-209ENST00000506244 ZNF835Q9Y2P0 537 aa15.29■□□□□ 0.04
SNCA-209ENST00000506244 LRRK2Q5S007 2527 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 FLNCQ14315 2725 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 OR14I1A6ND48 311 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 ANKRD28O15084 1053 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 LRRTM2O43300 516 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 HCN1O60741 890 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 SEMA7AO75326 666 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 NME6O75414 186 aaPredicted RBP15.28■□□□□ 0.04
SNCA-209ENST00000506244 NKX2-2O95096 273 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 IGHG3P01860 377 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 ALOX5P09917 674 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 GDF1P27539 372 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 GABRA3P34903 492 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 PTGS2P35354 604 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 CCT3P49368 545 aaKnown RBP15.28■□□□□ 0.04
SNCA-209ENST00000506244 HSF1Q00613 529 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 LRRC74AQ0VAA2 488 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 TP53BP2Q13625 1128 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 SLC10A1Q14973 349 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 SLC9B1Q4ZJI4 515 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 C1QL3Q5VWW1 255 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 OR4F3Q6IEY1 312 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 OR1J4Q8NGS1 313 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 CKAP2Q8WWK9 683 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 RELTQ969Z4 430 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 GIMAP5Q96F15 307 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 NODALQ96S42 347 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 STACQ99469 402 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 DEFB127Q9H1M4 99 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 LDAHQ9H6V9 325 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 HHATLQ9HCP6 504 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 SLCO1B3Q9NPD5 702 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 MED4Q9NPJ6 270 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 DUSP22Q9NRW4 184 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 ZNF446Q9NWS9 450 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 GIN1Q9NXP7 522 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 ERRFI1Q9UJM3 462 aaPredicted RBP15.28■□□□□ 0.04
SNCA-209ENST00000506244 FAF1Q9UNN5 650 aaPredicted RBP15.28■□□□□ 0.04
SNCA-209ENST00000506244 C15orf41Q9Y2V0 281 aa15.28■□□□□ 0.04
SNCA-209ENST00000506244 A0A1B0GTH9 108 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 PRSS51A0A1B0GVH4 220 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 SNPHO15079 494 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 UBDO15205 165 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 SUSD5O60279 629 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 IL33O95760 270 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 HMGN2P05204 90 aaKnown RBP15.27■□□□□ 0.04
SNCA-209ENST00000506244 S100A3P33764 101 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 EVI2BP34910 448 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 MAN2A2P49641 1150 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 CLK3P49761 638 aaKnown RBP15.27■□□□□ 0.04
SNCA-209ENST00000506244 HBA1P69905 142 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 SRSF1Q07955 248 aaKnown RBP eCLIP15.27■□□□□ 0.04
SNCA-209ENST00000506244 GAB1Q13480 694 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 FAM174BQ3ZCQ3 159 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 PDCD4Q53EL6 469 aaKnown RBP15.27■□□□□ 0.04
SNCA-209ENST00000506244 SPANXN4Q5MJ08 99 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 ANGPTL8Q6UXH0 198 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 MAVSQ7Z434 540 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 WDR53Q7Z5U6 358 aaPredicted RBP15.27■□□□□ 0.04
SNCA-209ENST00000506244 COX18Q8N8Q8 333 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 OR4N2Q8NGD1 307 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 OR4A15Q8NGL6 344 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 FAM57AQ8TBR7 257 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 CHMP6Q96FZ7 201 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 RMND5BQ96G75 393 aaPredicted RBP15.27■□□□□ 0.04
SNCA-209ENST00000506244 EXO5Q9H790 373 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 CXorf36Q9H7Y0 433 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 ACKR4Q9NPB9 350 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 TCF7L2Q9NQB0 619 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 ZIM2Q9NZV7 527 aa15.27■□□□□ 0.04
SNCA-209ENST00000506244 PCDHGB3Q9Y5G1 929 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms