RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 KLHL21Q9UJP4 597 aa2.7□□□□□ -1.98
CHD1-203ENST00000505657 FZR1Q9UM11 496 aa2.7□□□□□ -1.98
CHD1-203ENST00000505657 ABCG2Q9UNQ0 655 aa2.7□□□□□ -1.98
CHD1-203ENST00000505657 PLEKHA6Q9Y2H5 1048 aa2.7□□□□□ -1.98
CHD1-203ENST00000505657 STRAPQ9Y3F4 350 aaKnown RBP2.7□□□□□ -1.98
CHD1-203ENST00000505657 KNSTRNQ9Y448 316 aa2.7□□□□□ -1.98
CHD1-203ENST00000505657 FKBP7Q9Y680 259 aa2.7□□□□□ -1.98
CHD1-203ENST00000505657 LRRK1Q38SD2 2015 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 FAM220BPB1ANY3 271 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 BCAS2O75934 225 aaPredicted RBP2.69□□□□□ -1.98
CHD1-203ENST00000505657 NOL4O94818 638 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 AHCYP23526 432 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 MAGEA4P43358 317 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 RGRP47804 291 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 SLC6A8P48029 635 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 NT5C2P49902 561 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 METAP1P53582 386 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 NOP14P78316 857 aaKnown RBP2.69□□□□□ -1.98
CHD1-203ENST00000505657 NME3Q13232 169 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 DCAF4L1Q3SXM0 396 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 GLYR1Q49A26 553 aaPredicted RBP2.69□□□□□ -1.98
CHD1-203ENST00000505657 CCDC92Q53HC0 331 aaPredicted RBP2.69□□□□□ -1.98
CHD1-203ENST00000505657 ZNF57Q68EA5 555 aaPredicted RBP2.69□□□□□ -1.98
CHD1-203ENST00000505657 UFSP1Q6NVU6 142 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 WDR88Q6ZMY6 472 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 RABEPKQ7Z6M1 372 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 ZSCAN30Q86W11 494 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 APOBEC3FQ8IUX4 373 aaKnown RBP2.69□□□□□ -1.98
CHD1-203ENST00000505657 CENPSQ8N2Z9 138 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 WDR36Q8NI36 951 aaKnown RBP2.69□□□□□ -1.98
CHD1-203ENST00000505657 ADAMTS16Q8TE57 1224 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 TFB1MQ8WVM0 346 aaKnown RBP2.69□□□□□ -1.98
CHD1-203ENST00000505657 ATP6V0A1Q93050 837 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 TSPAN18Q96SJ8 248 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 KIR2DL4Q99706 377 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 ELOVL4Q9GZR5 314 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 THAP9Q9H5L6 903 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 SYTL2Q9HCH5 934 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 BARX2Q9UMQ3 279 aaPredicted RBP2.69□□□□□ -1.98
CHD1-203ENST00000505657 CA5BQ9Y2D0 317 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 CHD4Q14839 1912 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 GPRASP1Q5JY77 1395 aa2.69□□□□□ -1.98
CHD1-203ENST00000505657 IGLV8-61A0A075B6I0 122 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 SYCE3A1L190 88 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 NPIPA2E9PIF3 369 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 LYPD3O95274 346 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 SLC4A1P02730 911 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 PGK2P07205 417 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 STMN1P16949 149 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 SDC1P18827 310 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 ELK1P19419 428 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 STK19P49842 368 aaPredicted RBP2.68□□□□□ -1.98
CHD1-203ENST00000505657 GPC3P51654 580 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 RPS6P62753 249 aaKnown RBP2.68□□□□□ -1.98
CHD1-203ENST00000505657 MYBPC1Q00872 1141 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 PRKCEQ02156 737 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 PUDPQ08623 228 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 ZP4Q12836 540 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 RAB35Q15286 201 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 RAB12Q6IQ22 244 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 KRTAP5-5Q701N2 237 aaPredicted RBP2.68□□□□□ -1.98
CHD1-203ENST00000505657 GOLGA7Q7Z5G4 137 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 PARGQ86W56 976 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 ERICH1Q86X53 443 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 C9orf40Q8IXQ3 194 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 PRR22Q8IZ63 422 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 MCOLN2Q8IZK6 566 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 BATF2Q8N1L9 274 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 OR8H1Q8NGG4 311 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 CCDC47Q96A33 483 aaKnown RBP2.68□□□□□ -1.98
CHD1-203ENST00000505657 DPH7Q9BTV6 452 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 CARD6Q9BX69 1037 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 TSSK1BQ9BXA7 367 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 FTHL17Q9BXU8 183 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 EXOSC3Q9NQT5 275 aaKnown RBP2.68□□□□□ -1.98
CHD1-203ENST00000505657 HOMER3Q9NSC5 361 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 DPM3Q9P2X0 92 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 APOBEC3BQ9UH17 382 aaKnown RBP2.68□□□□□ -1.98
CHD1-203ENST00000505657 IL20RAQ9UHF4 553 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 MOSPD1Q9UJG1 213 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 METP08581 1390 aa2.68□□□□□ -1.98
CHD1-203ENST00000505657 COL16A1Q07092 1604 aaPredicted RBP2.68□□□□□ -1.98
CHD1-203ENST00000505657 TRBV7-9A0A0J9YWB2 115 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 SLC9B1P1A6NJY1 282 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 H0YL77 283 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 CD1EP15812 388 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 PRDX2P32119 198 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 HSPA1LP34931 641 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 DRD3P35462 400 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 STX17P56962 302 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 SRYQ05066 204 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 FUT7Q11130 342 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 PKN2Q16513 984 aaKnown RBP2.67□□□□□ -1.98
CHD1-203ENST00000505657 PARP6Q2NL67 630 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 TMEM52BQ4KMG9 183 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 SBK1Q52WX2 424 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 OR6B2Q6IFH4 312 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 LEG1Q6P5S2 330 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 SLC39A4Q6P5W5 647 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 FAM159AQ6UWV7 190 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms