RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 GRHPRQ9UBQ7 328 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 SH2B3Q9UQQ2 575 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 TMEM5Q9Y2B1 443 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 MYF5P13349 255 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 EIF2B2P49770 351 aaKnown RBP13.25□□□□□ -0.29
TCOF1-207ENST00000504761 TRA2BP62995 288 aaKnown RBP13.25□□□□□ -0.29
TCOF1-207ENST00000504761 ACY1Q03154 408 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 ZNF385BQ569K4 471 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 GTF2IRD2BQ6EKJ0 949 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 GTF2IRD2Q86UP8 949 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 TSPYL5Q86VY4 417 aaPredicted RBP13.25□□□□□ -0.29
TCOF1-207ENST00000504761 ERI1Q8IV48 349 aaKnown RBP13.25□□□□□ -0.29
TCOF1-207ENST00000504761 CHERPQ8IWX8 916 aaKnown RBP13.25□□□□□ -0.29
TCOF1-207ENST00000504761 NLGN4XQ8N0W4 816 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 ZNF675Q8TD23 568 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 ADAMTS16Q8TE57 1224 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 UBAP1Q9NZ09 502 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 ARID2Q68CP9 1835 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 UNC13CQ8NB66 2214 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 SBF1O95248 1867 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 ZNF726A6NNF4 738 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 H0YJX3 145 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 EIF1AYO14602 144 aaKnown RBP13.25□□□□□ -0.29
TCOF1-207ENST00000504761 AKAP8O43823 692 aaKnown RBP13.25□□□□□ -0.29
TCOF1-207ENST00000504761 PLOD3O60568 738 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 ISOC1Q96CN7 298 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 AMDHD1Q96NU7 426 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 GPER1Q99527 375 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 PELOQ9BRX2 385 aaKnown RBP13.25□□□□□ -0.29
TCOF1-207ENST00000504761 TIMMDC1Q9NPL8 285 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 CUTCQ9NTM9 273 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.25□□□□□ -0.29
TCOF1-207ENST00000504761 IGLV3-16A0A075B6K0 115 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 A0A075B6Q4 140 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 C2orf92A0A1B0GVN3 265 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 UNC119BA6NIH7 251 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 TLX3O43711 291 aaPredicted RBP13.25□□□□□ -0.29
TCOF1-207ENST00000504761 OMPP47874 163 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 ZNF41P51814 821 aaPredicted RBP13.25□□□□□ -0.29
TCOF1-207ENST00000504761 EMP2P54851 167 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 SERTAD2Q14140 314 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 KCNAB1Q14722 419 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 SMN1Q16637 294 aaKnown RBP13.25□□□□□ -0.29
TCOF1-207ENST00000504761 CEP78Q5JTW2 689 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 DCST2Q5T1A1 773 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 RPTNQ6XPR3 784 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 ATG14Q6ZNE5 492 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 OR2A1Q8NGT9 310 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 DIO2Q92813 273 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 ZFP3Q96NJ6 502 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 TEX101Q9BY14 249 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 STRADBQ9C0K7 418 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 CD93Q9NPY3 652 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 NANSQ9NR45 359 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 FGF21Q9NSA1 209 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 C14orf105Q9NVL8 296 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 ZNF638Q14966 1978 aaKnown RBP13.24□□□□□ -0.29
TCOF1-207ENST00000504761 LOC105369274A0A096LPK9 316 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 LOC102723532A0A0G2JNH3 316 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 ASNA1O43681 348 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 AK1P00568 194 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 PLGP00747 810 aaPredicted RBP13.24□□□□□ -0.29
TCOF1-207ENST00000504761 ADAP00813 363 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 HK1P19367 917 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 GRPRP30550 384 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 BTBD16Q32M84 506 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 ZNF547Q8IVP9 402 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 OR4N4Q8N0Y3 316 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 SLC16A11Q8NCK7 471 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 OR4K13Q8NH42 304 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 OR51Q1Q8NH59 317 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 GATA6Q92908 595 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 SAMD8Q96LT4 415 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 KCNN2Q9H2S1 579 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 ZNF304Q9HCX3 659 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 ABCD2Q9UBJ2 740 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 SNX11Q9Y5W9 270 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 TRAPPC13A5PLN9 417 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 PLOD2O00469 737 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 SLC22A1O15245 554 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 ACOX3O15254 700 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 ST6GAL1P15907 406 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 GBX2P52951 348 aaPredicted RBP13.24□□□□□ -0.29
TCOF1-207ENST00000504761 TRIM61Q5EBN2 209 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 WDR20Q8TBZ3 569 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 MS4A6EQ96DS6 147 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 ASPNQ9BXN1 380 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 GAREM1Q9H706 876 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 ZNF696Q9H7X3 374 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 PTGES2Q9H7Z7 377 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 GNG8Q9UK08 70 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 ADAM29Q9UKF5 820 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 TMPRSS11EQ9UL52 423 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 AP1M2Q9Y6Q5 423 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 LOC285556D6RIA3 1793 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 A8MVJ9 347 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 PSMD9O00233 223 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 SRPX2O60687 465 aaPredicted RBP13.24□□□□□ -0.29
TCOF1-207ENST00000504761 TNFRSF17Q02223 184 aa13.24□□□□□ -0.29
TCOF1-207ENST00000504761 CDK5R2Q13319 367 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms