RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 CLEC4AQ9UMR7 237 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 CHMP2BQ9UQN3 213 aa14.15□□□□□ -0.14
PDLIM7-210ENST00000503827 GOLGA6L10A6NI86 522 aa14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 ELOA3DA6NLF2 546 aaPredicted RBP14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 K7EPI3 171 aa14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 CD8AP01732 235 aa14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 CD1DP15813 335 aa14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 SLC25A16P16260 332 aa14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 IL12BP29460 328 aa14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 MGAT5Q09328 741 aa14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 MGAT2Q10469 447 aa14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 GANABQ14697 944 aaKnown RBP14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 ELOA3BQ3SY89 546 aa14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 UBAP2Q5T6F2 1119 aaKnown RBP14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 KBTBD8Q8NFY9 601 aa14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 ELOA3Q8NG57 546 aa14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 OR52R1Q8NGF1 315 aa14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 GRK7Q8WTQ7 553 aa14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 S100PBPQ96BU1 408 aa14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 HDHD5Q9BXW7 423 aa14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 DSN1Q9H410 356 aa14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 SMYD2Q9NRG4 433 aa14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 ZNF639Q9UID6 485 aa14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 ALPK2Q86TB3 2170 aa14.14□□□□□ -0.15
PDLIM7-210ENST00000503827 OR2M5A3KFT3 312 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 B4DXG7 233 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 DNALI1O14645 258 aaPredicted RBP14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 TSPAN2O60636 221 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 SS18L1O75177 396 aaPredicted RBP14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 CBX7O95931 251 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 ATP1B1P05026 303 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 IGHV4-31P0DP07 118 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 HNF1AP20823 631 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 PTMSP20962 102 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 GAS1P54826 345 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 POU4F1Q01851 419 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 FRG1Q14331 258 aaKnown RBP14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 SQLEQ14534 574 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 LIPJQ5W064 366 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 STEAP4Q687X5 459 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 BHLHB9Q6PI77 547 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 C12orf54Q6X4T0 127 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 IL17RELQ6ZVW7 336 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 DTX2Q86UW9 622 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 PDIK1LQ8N165 341 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 FADS6Q8N9I5 356 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 OR5M1Q8NGP8 315 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 TSPAN17Q96FV3 270 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 RHOJQ9H4E5 214 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 CISD1Q9NZ45 108 aaKnown RBP14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 KCNS2Q9ULS6 477 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 B3GALT5Q9Y2C3 310 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 GPR55Q9Y2T6 319 aaPredicted RBP14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 AP4B1Q9Y6B7 739 aa14.13□□□□□ -0.15
PDLIM7-210ENST00000503827 KCNAB3O43448 404 aa14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 SIX3O95343 332 aaPredicted RBP14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 WISP3O95389 354 aaPredicted RBP14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 IGFBP5P24593 272 aa14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 SLC6A8P48029 635 aa14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 EMDP50402 254 aa14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 PNLIPRP2P54317 469 aa14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 ILF2Q12905 390 aaKnown RBP14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 PPP1R7Q15435 360 aa14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 TRMT12Q53H54 448 aaKnown RBP14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 LARP4Q71RC2 724 aaKnown RBP eCLIP14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 OR2M3Q8NG83 312 aa14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 RNF138Q8WVD3 245 aa14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 TRIM2Q9C040 744 aa14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 PTGES2Q9H7Z7 377 aa14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 CAB39LQ9H9S4 337 aa14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 FOLH1BQ9HBA9 442 aa14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 SDHAF3Q9NRP4 125 aa14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 GLRX2Q9NS18 164 aa14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 NSMCE4AQ9NXX6 385 aa14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 NUDT4Q9NZJ9 180 aa14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 STOML1Q9UBI4 398 aa14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 ANGPTL3Q9Y5C1 460 aa14.12□□□□□ -0.15
PDLIM7-210ENST00000503827 C17orf51A8MQB3 221 aa14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 H0YIV9 168 aa14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 SCO2O43819 266 aa14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 ERAL1O75616 437 aaKnown RBP14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 CSNK2A2P19784 350 aaPredicted RBP14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 IL32P24001 234 aa14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 CFPP27918 469 aa14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 ADH6P28332 368 aa14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 FEN1P39748 380 aaKnown RBP14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 EIF1AXP47813 144 aaKnown RBP14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 GZMKP49863 264 aa14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 GPX6P59796 221 aa14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 PSPHP78330 225 aa14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 MRPS22P82650 360 aaKnown RBP14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 BSPH1Q075Z2 132 aa14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 TAB1Q15750 504 aa14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 FAM120AOSQ5T036 256 aa14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 AGAP6Q5VW22 663 aa14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 FAM166AQ6J272 317 aa14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 FIGNL1Q6PIW4 674 aa14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 MEX3DQ86XN8 651 aaKnown RBP14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 TEX9Q8N6V9 391 aa14.11□□□□□ -0.15
PDLIM7-210ENST00000503827 STAG3L4Q8TBR4 150 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms