RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 SLC16A4O15374 487 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 FABP7O15540 132 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 DNAJB6O75190 326 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 XYLBO75191 536 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 KHDRBS3O75525 346 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 UBL3O95164 117 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 BRI3O95415 125 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 TXNDC12O95881 172 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 NMBP08949 121 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 UBBP0CG47 229 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 UBCP0CG48 685 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 POU2F1P14859 743 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 AZGP1P25311 298 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CERS1P27544 350 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ELK4P28324 431 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 OTX1P32242 354 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SLC1A3P43003 542 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 GLP1RP43220 463 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SRP9P49458 86 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 RNF144AP50876 292 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 NUDT6P53370 316 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 RPS27AP62979 156 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 UBA52P62987 128 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 BDH1Q02338 343 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 DBPQ10586 325 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 PMS2P11Q13670 270 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CHRNA6Q15825 494 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 GRIK4Q16099 956 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 HAGHQ16775 308 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 VPS26BQ4G0F5 336 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 C6orf136Q5SQH8 315 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 KIAA1211LQ6NV74 962 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 PMF1Q6P1K2 205 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 FAHD1Q6P587 224 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ISLR2Q6UXK2 745 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 TPGS1Q6ZTW0 290 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ANKS3Q6ZW76 656 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 MOB2Q70IA6 237 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ZNF551Q7Z340 670 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 MRPL52Q86TS9 123 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 KSR1Q8IVT5 923 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 MAML2Q8IZL2 1156 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 STK40Q8N2I9 435 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 NPWQ8N729 165 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 EFCAB3Q8N7B9 438 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 TEX19Q8NA77 164 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ZBTB44Q8NCP5 570 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 OR6P1Q8NGX9 317 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SLC7A13Q8TCU3 470 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CSGALNACT1Q8TDX6 532 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 TWIST2Q8WVJ9 160 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 LCN9Q8WX39 176 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ROBO4Q8WZ75 1007 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ARL11Q969Q4 196 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 PLD4Q96BZ4 506 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CCDC120Q96HB5 630 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ITCHQ96J02 903 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ZNF583Q96ND8 569 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 KCNJ15Q99712 375 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 EGFL8Q99944 293 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 NUDT16L1Q9BRJ7 211 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ABCG8Q9H221 673 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SOX17Q9H6I2 414 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 PPP1R3EQ9H7J1 279 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 AKTIPQ9H8T0 292 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ABCB9Q9NP78 766 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SNX6Q9UNH7 406 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 KALRNO60229 2985 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 DSPP15924 2871 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 TRDV1A0A1B0GX56 115 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 WDR27A2RRH5 827 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 LACTBL1A8MY62 500 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 M0QZK8 103 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SCAMP1O15126 338 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ENTPD6O75354 484 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 RDH16O75452 317 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 POP7O75817 140 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SERPIND1P05546 499 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 INSRRP14616 1297 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 GNSP15586 552 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 GSTM3P21266 225 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 UCP1P25874 307 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 IFNGR2P38484 337 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 EVX1P49640 407 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ANXA11P50995 505 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 TAS2R43P59537 309 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 KIAA1024LP59773 190 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 DHODHQ02127 395 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SNTB2Q13425 540 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 MED22Q15528 200 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 TAF1AQ15573 450 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 NTRK2Q16620 822 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 EXOC3L2Q2M3D2 409 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 MINDY4Q4G0A6 757 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 RNF219Q5W0B1 726 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ZC3H14Q6PJT7 736 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CASP12Q6UXS9 341 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SERPINA11Q86U17 422 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ATCAYQ86WG3 371 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SLC41A1Q8IVJ1 513 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms