RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 PRKAB1Q9Y478 270 aa6.97□□□□□ -1.29
PDGFC-203ENST00000502773 A0A075B6Q4 140 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 FEZF1A0PJY2 475 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 A8MUA0 341 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 PRODHO43272 600 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 PLATP00750 562 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 FCARP24071 287 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 PCSK6P29122 969 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 IGFALSP35858 605 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 PRKCDQ05655 676 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 MLLT11Q13015 90 aaPredicted RBP6.96□□□□□ -1.29
PDGFC-203ENST00000502773 ZXDCQ2QGD7 858 aaPredicted RBP6.96□□□□□ -1.29
PDGFC-203ENST00000502773 GAB4Q2WGN9 574 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 C3orf38Q5JPI3 329 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 ENTPD8Q5MY95 495 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 XAF1Q6GPH4 301 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 GALNT11Q8NCW6 608 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 OR6C4Q8NGE1 309 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 RNASE11Q8TAA1 199 aaKnown RBP6.96□□□□□ -1.29
PDGFC-203ENST00000502773 SETD6Q8TBK2 473 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 GGHQ92820 318 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 CD180Q99467 661 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 MGLLQ99685 303 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 TM9SF2Q99805 663 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 OR2B2Q9GZK3 357 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 MIR1-1HGQ9H1L0 117 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 IFT22Q9H7X7 185 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 SLC23A2Q9UGH3 650 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 CD207Q9UJ71 328 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 ACAD8Q9UKU7 415 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 NUP50Q9UKX7 468 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 NEUROG3Q9Y4Z2 214 aa6.96□□□□□ -1.29
PDGFC-203ENST00000502773 OBSL1O75147 1896 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 TRAPPC13A5PLN9 417 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 ANTXRLA6NF34 631 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 FAM170BA6NMN3 283 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 HMGN4O00479 90 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 DIRAS1O95057 198 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 SERPINA3P01011 423 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 HLA-DPB1P04440 258 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 NUDT7P0C024 238 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 RNH1P13489 461 aaKnown RBP6.96□□□□□ -1.3
PDGFC-203ENST00000502773 CD53P19397 219 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 EN2P19622 333 aaPredicted RBP6.96□□□□□ -1.3
PDGFC-203ENST00000502773 ALAS2P22557 587 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 KIR2DL1P43626 348 aaPredicted RBP6.96□□□□□ -1.3
PDGFC-203ENST00000502773 BNC1Q01954 994 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 ZMYND11Q15326 602 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 SPHARQ15513 63 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 CTU2Q2VPK5 515 aaKnown RBP6.96□□□□□ -1.3
PDGFC-203ENST00000502773 COX20Q5RI15 118 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 SLC46A3Q7Z3Q1 461 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 GPALPP1Q8IXQ4 340 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 CCDC116Q8IYX3 515 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 KLHL36Q8N4N3 616 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 ANKRD53Q8N9V6 530 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 OR4K5Q8NGD3 323 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 RIT1Q92963 219 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 OTULINQ96BN8 352 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 ELP4Q96EB1 424 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 SH3YL1Q96HL8 342 aaPredicted RBP6.96□□□□□ -1.3
PDGFC-203ENST00000502773 LRRC3BQ96PB8 259 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 DHRS9Q9BPW9 319 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 FN3KQ9H479 309 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 MBNL1Q9NR56 388 aaKnown RBP6.96□□□□□ -1.3
PDGFC-203ENST00000502773 TESQ9UGI8 421 aaKnown RBP6.96□□□□□ -1.3
PDGFC-203ENST00000502773 ASB4Q9Y574 426 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 MAGED1Q9Y5V3 778 aaPredicted RBP6.96□□□□□ -1.3
PDGFC-203ENST00000502773 CFAP20Q9Y6A4 193 aaKnown RBP6.96□□□□□ -1.3
PDGFC-203ENST00000502773 ZFC3H1O60293 1989 aaKnown RBP6.96□□□□□ -1.3
PDGFC-203ENST00000502773 OR6C70A6NIJ9 312 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 H7C2Y5 167 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 HCN1O60741 890 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 GPR75O95800 540 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 YES1P07947 543 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 POLR2CP19387 275 aaPredicted RBP6.96□□□□□ -1.3
PDGFC-203ENST00000502773 TNNI3P19429 210 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 AGXTP21549 392 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 NT5EP21589 574 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 GALP22466 123 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 CHMP24386 653 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 ELAVL4P26378 380 aaKnown RBP6.96□□□□□ -1.3
PDGFC-203ENST00000502773 PTBP1P26599 531 aaKnown RBP eCLIP6.96□□□□□ -1.33e-6■■■■□ 25.7
PDGFC-203ENST00000502773 G0S2P27469 103 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 BCL6P41182 706 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 OR1E2P47887 323 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 ACTC1P68032 377 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 ACTA1P68133 377 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 GINS1Q14691 196 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 ARHGAP11BQ3KRB8 267 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 TMEM196Q5HYL7 178 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 C1orf94Q6P1W5 598 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 HSDL2Q6YN16 418 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 TMEM179BQ7Z7N9 219 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 HS3ST5Q8IZT8 346 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 ZNF619Q8N2I2 560 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 ZNF527Q8NB42 609 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 OR2T33Q8NG76 320 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 OR6Q1Q8NGQ2 317 aa6.96□□□□□ -1.3
PDGFC-203ENST00000502773 OR8K5Q8NH50 307 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms