RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 BACE1P56817 501 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 RGS8P57771 180 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 YWHAEP62258 255 aaKnown RBP3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 IRF8Q02556 426 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 ASPHQ12797 758 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 NME3Q13232 169 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 GPR176Q14439 515 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 EXOSC7Q15024 291 aaKnown RBP3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 STK38Q15208 465 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 EFNB3Q15768 340 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 CCL15Q16663 113 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 LINC01620Q4KN68 170 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 TMEM119Q4V9L6 283 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 TEX44Q53QW1 395 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 LCN1P1Q5VSP4 162 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 FNDC7Q5VTL7 733 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 OR2A2Q6IF42 318 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 SLC25A25Q6KCM7 469 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 UQCC3Q6UW78 93 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 SHFQ7M4L6 423 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 CPEB2Q7Z5Q1 589 aaKnown RBP3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 CTU1Q7Z7A3 348 aaKnown RBP3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 VRK2Q86Y07 508 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 NKAIN4Q8IVV8 208 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 MMD2Q8IY49 270 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 LGI2Q8N0V4 545 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 GTPBP8Q8N3Z3 284 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 FAM86B1Q8N7N1 296 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 NPEPL1Q8NDH3 523 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 FAM83FQ8NEG4 500 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 OR5R1Q8NH85 324 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 FGFBP3Q8TAT2 258 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 CD300LFQ8TDQ1 290 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 GPX8Q8TED1 209 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 ANKRD7Q92527 254 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 TOP1MTQ969P6 601 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 PINX1Q96BK5 328 aaKnown RBP3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 SGK3Q96BR1 496 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZG16BQ96DA0 208 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 RBM41Q96IZ5 413 aaKnown RBP3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 FAM20AQ96MK3 541 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 INPP4AQ96PE3 977 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 DUX5Q96PT3 197 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 CCT8L2Q96SF2 557 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 KRT12Q99456 494 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 CMKLR1Q99788 373 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 UQCC2Q9BRT2 126 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 CENPKQ9BS16 269 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 EFHD1Q9BUP0 239 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 ST6GALNAC5Q9BVH7 336 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 PRRG3Q9BZD7 231 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 IL25Q9H293 177 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 C6orf50Q9HD87 102 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 ACKR4Q9NPB9 350 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 POLE4Q9NR33 117 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 PNO1Q9NRX1 252 aaKnown RBP3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 GKN1Q9NS71 199 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 DDX19AQ9NUU7 478 aaKnown RBP3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 SPHK1Q9NYA1 384 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 ERVK-18Q9QC07 812 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 CTSFQ9UBX1 484 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF639Q9UID6 485 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 PACSIN3Q9UKS6 424 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 VANGL2Q9ULK5 521 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 NCKAP1Q9Y2A7 1128 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 A0A0G2JMZ2 1700 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZSWIM8A7E2V4 1837 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 PLXNB2O15031 1838 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 ARID2Q68CP9 1835 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 A0A1W2PP11 408 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 C1QTNF3-AMACRE9PGA6 284 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 NBR2O15453 112 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZIC3O60481 467 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 RAMP2O60895 175 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 KCNJ13O60928 360 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 GRAP2O75791 330 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 KRT36O76013 467 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 DFFBO76075 338 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 WISP2O76076 250 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 SMC2O95347 1197 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 ECDO95905 644 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 HPRP00739 348 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 RAF1P04049 648 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 SERPINF2P08697 491 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 HIST1H2AGP0C0S8 130 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 GSTM3P21266 225 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 LAP3P28838 519 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 PPP2R1BP30154 601 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 S100A5P33763 92 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 GLIPR1P48060 266 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 NPY2RP49146 381 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 CCT3P49368 545 aaKnown RBP3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 CDH6P55285 790 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 HNRNPH2P55795 449 aaKnown RBP3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 DAOAP59103 153 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 RAB11AP62491 216 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 HSF1Q00613 529 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 ORC2Q13416 577 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 TMEM132DQ14C87 1099 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 HEPACAMQ14CZ8 416 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms