RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 LGSNQ5TDP6 509 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 CLEC9AQ6UXN8 241 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 SYT10Q6XYQ8 523 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 RPS27LQ71UM5 84 aaKnown RBP10.9□□□□□ -0.66
CNOT4-211ENST00000498534 ZNF572Q7Z3I7 529 aaPredicted RBP10.9□□□□□ -0.66
CNOT4-211ENST00000498534 RELL1Q8IUW5 271 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 MEIOBQ8N635 442 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 OR4K17Q8NGC6 315 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 METTL6Q8TCB7 284 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 KAT2AQ92830 837 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 PIGTQ969N2 578 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 BTBD9Q96Q07 612 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 SLC39A3Q9BRY0 314 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 G6PC3Q9BUM1 346 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 ZNF395Q9H8N7 513 aaPredicted RBP10.9□□□□□ -0.66
CNOT4-211ENST00000498534 SDHAF3Q9NRP4 125 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 ZNF226Q9NYT6 803 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 TAS2R9Q9NYW1 312 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 SENP1Q9P0U3 644 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 CLCF1Q9UBD9 225 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 MCM8Q9UJA3 840 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 FBXL2Q9UKC9 423 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 OR10H1Q9Y4A9 318 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 A0A1B0GTL3 188 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 A0A1W2PNV4 684 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 CCDC151A5D8V7 595 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 SLC22A20A6NK97 555 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 TRIM49D1C9J1S8 452 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 POC1B-GALNT4F8VUJ3 575 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 MANBAO00462 879 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 TSPAN2O60636 221 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 SMPD2O60906 423 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 SUPT7LO94864 414 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 TGM6O95932 706 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 TCEA1P23193 301 aaKnown RBP10.89□□□□□ -0.67
CNOT4-211ENST00000498534 GRK2P25098 689 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 HMOX2P30519 316 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 PCYT1AP49585 367 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 DSCR4P56555 118 aaPredicted RBP10.89□□□□□ -0.67
CNOT4-211ENST00000498534 CLDN18P56856 261 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 CORO7P57737 925 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 ACSM2AQ08AH3 577 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 FAM27E3Q08E93 113 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 CSTF3Q12996 717 aaKnown RBP10.89□□□□□ -0.67
CNOT4-211ENST00000498534 RASA2Q15283 850 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 ZNF628Q5EBL2 1059 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 ACSM2BQ68CK6 577 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 PLXDC2Q6UX71 529 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 Q71RC1 249 aaPredicted RBP10.89□□□□□ -0.67
CNOT4-211ENST00000498534 SLC44A2Q8IWA5 706 aaPredicted RBP10.89□□□□□ -0.67
CNOT4-211ENST00000498534 CDYL2Q8N8U2 506 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 CNEP1R1Q8N9A8 125 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 EXOSC8Q96B26 276 aaKnown RBP10.89□□□□□ -0.67
CNOT4-211ENST00000498534 MTBPQ96DY7 904 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 PGM2Q96G03 612 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 VSTM2LQ96N03 204 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 FAM111AQ96PZ2 611 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 BBS4Q96RK4 519 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 HBEGFQ99075 208 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 PAFAH2Q99487 392 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 SMR3AQ99954 134 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 C1QTNF3Q9BXJ4 246 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 FUT8Q9BYC5 575 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 STMN4Q9H169 189 aaPredicted RBP10.89□□□□□ -0.67
CNOT4-211ENST00000498534 SLC35C2Q9NQQ7 365 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 PPP4R1LQ9P1A2 415 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 HEY2Q9UBP5 337 aa10.89□□□□□ -0.67
CNOT4-211ENST00000498534 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 A8MT66 165 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 LINC01387J3KSC0 135 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 CTIFO43310 598 aaKnown RBP10.88□□□□□ -0.67
CNOT4-211ENST00000498534 PCDH7O60245 1069 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 PLOD3O60568 738 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 TNFSF13O75888 250 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 IL3P08700 152 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 SNRPAP09012 282 aaKnown RBP10.88□□□□□ -0.67
CNOT4-211ENST00000498534 FPR1P21462 350 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 CD79BP40259 229 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 MC3RP41968 323 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 KCNJ5P48544 419 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 CLK3P49761 638 aaKnown RBP10.88□□□□□ -0.67
CNOT4-211ENST00000498534 SPIN4Q56A73 249 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 GPRIN3Q6ZVF9 776 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 UBQLNLQ8IYU4 475 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 OR9A2Q8NGT5 310 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 IFT81Q8WYA0 676 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 EFHD2Q96C19 240 aaPredicted RBP10.88□□□□□ -0.67
CNOT4-211ENST00000498534 STARD4Q96DR4 205 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 WFIKKN1Q96NZ8 548 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 PIP5K1AQ99755 562 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 MED18Q9BUE0 208 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 SHCBP1LQ9BZQ2 653 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 CDC42EP4Q9H3Q1 356 aaKnown RBP10.88□□□□□ -0.67
CNOT4-211ENST00000498534 DSN1Q9H410 356 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 PTGES2Q9H7Z7 377 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 ANKRA2Q9H9E1 313 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 FOLH1BQ9HBA9 442 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 ELOVL5Q9NYP7 299 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 ZNF180Q9UJW8 692 aa10.88□□□□□ -0.67
CNOT4-211ENST00000498534 ZNF225Q9UK10 706 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms