RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 FKBP1BP68106 108 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 P2RY14Q15391 338 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 OR2B11Q5JQS5 317 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 SNRNP48Q6IEG0 339 aaKnown RBP0.72□□□□□ -2.29
SGMS1-205ENST00000498514 CCDC70Q6NSX1 233 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 RHBDD2Q6NTF9 364 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 DCLRE1AQ6PJP8 1040 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 C4orf50Q6ZRC1 276 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 Q6ZRG5 221 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 SLFN11Q7Z7L1 901 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 ALLCQ8N6M5 410 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 UBTD2Q8WUN7 234 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 NEIL2Q969S2 332 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 RMI2Q96E14 147 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 CXXC4Q9H2H0 198 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 LCMT1Q9UIC8 334 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 ZNF225Q9UK10 706 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 SMC3Q9UQE7 1217 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 ERVW-1Q9UQF0 538 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 OR1A2Q9Y585 309 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 UBIAD1Q9Y5Z9 338 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 VIRMAQ69YN4 1812 aaKnown RBP0.72□□□□□ -2.29
SGMS1-205ENST00000498514 FAM186AA6NE01 2351 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 CUX1P39880 1505 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 ANK2Q01484 3957 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 AHNAK2Q8IVF2 5795 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 CACNA1DQ01668 2161 aa0.72□□□□□ -2.29
SGMS1-205ENST00000498514 CEP170Q5SW79 1584 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 NEURL4Q96JN8 1562 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 CASZ1Q86V15 1759 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 N4BP1O75113 896 aaKnown RBP0.71□□□□□ -2.3
SGMS1-205ENST00000498514 INSP01308 110 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 RCC1P18754 421 aaPredicted RBP0.71□□□□□ -2.3
SGMS1-205ENST00000498514 CAPN3P20807 821 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 GP5P40197 560 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 CSNK1DP48730 415 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 LHX2P50458 406 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 MADCAM1Q13477 382 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 ZIC1Q15915 447 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 CST9LP1Q5W188 147 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 C11orf57Q6ZUT1 292 aaPredicted RBP0.71□□□□□ -2.3
SGMS1-205ENST00000498514 CYP4V2Q6ZWL3 525 aaPredicted RBP0.71□□□□□ -2.3
SGMS1-205ENST00000498514 FRA10AC1Q70Z53 315 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 MAATS1Q7Z4T9 603 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 PPP1R27Q86WC6 154 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 WDR49Q8IV35 697 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 C9orf40Q8IXQ3 194 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 FAM71E2Q8N5Q1 922 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 SAP25Q8TEE9 199 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 TAF4BQ92750 862 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 CAPNS2Q96L46 248 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 LINC00477Q96M19 166 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 PSMD1Q99460 953 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 ALG9Q9H6U8 611 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 DCLRE1BQ9H816 532 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 SNX8Q9Y5X2 465 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 FAM169AQ9Y6X4 670 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 PHLPP1O60346 1717 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 CEP295Q9C0D2 2601 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 PLECQ15149 4684 aaKnown RBP0.71□□□□□ -2.3
SGMS1-205ENST00000498514 USP9YO00507 2555 aaPredicted RBP0.71□□□□□ -2.3
SGMS1-205ENST00000498514 PDS5BQ9NTI5 1447 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 SSPOA2VEC9 5147 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 TARBP1Q13395 1621 aaKnown RBP0.71□□□□□ -2.3
SGMS1-205ENST00000498514 HMCN2Q8NDA2 5059 aa0.71□□□□□ -2.3
SGMS1-205ENST00000498514 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 DYNC1H1Q14204 4646 aaKnown RBP0.7□□□□□ -2.3
SGMS1-205ENST00000498514 KDM5BQ9UGL1 1544 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 NUP188Q5SRE5 1749 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 TNKS1BP1Q9C0C2 1729 aaKnown RBP0.7□□□□□ -2.3
SGMS1-205ENST00000498514 HIVEP1P15822 2718 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 CENPEQ02224 2701 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 ZNF469Q96JG9 3925 aaPredicted RBP0.7□□□□□ -2.3
SGMS1-205ENST00000498514 DOPEY2Q9Y3R5 2298 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 COL4A6Q14031 1691 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 ATP6AP2A0A1C7CYW4 349 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 GTPBP10A4D1E9 387 aaKnown RBP0.7□□□□□ -2.3
SGMS1-205ENST00000498514 MEI4A8MW99 385 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 TBL1XO60907 577 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 RETP07949 1114 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 MRPL3P09001 348 aaKnown RBP0.7□□□□□ -2.3
SGMS1-205ENST00000498514 LBPP18428 481 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 NNMTP40261 264 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 CAPZA2P47755 286 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 CLNS1AP54105 237 aaKnown RBP0.7□□□□□ -2.3
SGMS1-205ENST00000498514 DPYSL3Q14195 570 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 MEF2DQ14814 521 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 SMIM5Q71RC9 77 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 ITIH5Q86UX2 942 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 ANKRD46Q86W74 232 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 TTC5Q8N0Z6 440 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 FAM210BQ96KR6 192 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 PRO3102Q9H379 93 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 ESM1Q9NQ30 184 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 CENPMQ9NSP4 180 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 EMCNQ9ULC0 261 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 ATG4BQ9Y4P1 393 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 RFNGQ9Y644 331 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 CDH10Q9Y6N8 788 aa0.7□□□□□ -2.3
SGMS1-205ENST00000498514 FAT3Q8TDW7 4589 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms