RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 GPR55Q9Y2T6 319 aaPredicted RBP12.54□□□□□ -0.4
CCDC58-207ENST00000498466 ZNF175Q9Y473 711 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 FAM159BA6NKW6 160 aa12.53□□□□□ -0.4
CCDC58-207ENST00000498466 C17orf51A8MQB3 221 aa12.53□□□□□ -0.4
CCDC58-207ENST00000498466 B4DXG7 233 aa12.53□□□□□ -0.4
CCDC58-207ENST00000498466 H3BML4 177 aa12.53□□□□□ -0.4
CCDC58-207ENST00000498466 TLX2O43763 284 aaPredicted RBP12.53□□□□□ -0.4
CCDC58-207ENST00000498466 TSPAN2O60636 221 aa12.53□□□□□ -0.4
CCDC58-207ENST00000498466 HK1P19367 917 aa12.53□□□□□ -0.4
CCDC58-207ENST00000498466 SUCLG1P53597 346 aaKnown RBP12.53□□□□□ -0.4
CCDC58-207ENST00000498466 ALDH18A1P54886 795 aaKnown RBP12.53□□□□□ -0.4
CCDC58-207ENST00000498466 DUSP2Q05923 314 aa12.53□□□□□ -0.4
CCDC58-207ENST00000498466 ETFDHQ16134 617 aa12.53□□□□□ -0.4
CCDC58-207ENST00000498466 TTC19Q6DKK2 380 aaPredicted RBP12.53□□□□□ -0.4
CCDC58-207ENST00000498466 PPP4R4Q6NUP7 873 aa12.53□□□□□ -0.4
CCDC58-207ENST00000498466 LARP4Q71RC2 724 aaKnown RBP eCLIP12.53□□□□□ -0.4
CCDC58-207ENST00000498466 FAM214BQ7L5A3 538 aa12.53□□□□□ -0.4
CCDC58-207ENST00000498466 WFDC8Q8IUA0 241 aa12.53□□□□□ -0.4
CCDC58-207ENST00000498466 RHEBL1Q8TAI7 183 aa12.53□□□□□ -0.4
CCDC58-207ENST00000498466 KCTD4Q8WVF5 259 aa12.53□□□□□ -0.4
CCDC58-207ENST00000498466 AKAP1Q92667 903 aaKnown RBP eCLIP12.53□□□□□ -0.4
CCDC58-207ENST00000498466 TRMT61AQ96FX7 289 aaKnown RBP12.53□□□□□ -0.4
CCDC58-207ENST00000498466 DSN1Q9H410 356 aa12.53□□□□□ -0.4
CCDC58-207ENST00000498466 SAYSD1Q9NPB0 183 aa12.53□□□□□ -0.4
CCDC58-207ENST00000498466 SNX24Q9Y343 169 aa12.53□□□□□ -0.4
CCDC58-207ENST00000498466 ZNF337Q9Y3M9 751 aa12.53□□□□□ -0.4
CCDC58-207ENST00000498466 ZNF780BQ9Y6R6 833 aa12.53□□□□□ -0.4
CCDC58-207ENST00000498466 SONP18583 2426 aaKnown RBP12.52□□□□□ -0.4
CCDC58-207ENST00000498466 NBEAL1Q6ZS30 2694 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 SCO2O43819 266 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 CD5LO43866 347 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 SIX3O95343 332 aaPredicted RBP12.52□□□□□ -0.41
CCDC58-207ENST00000498466 ALDOAP04075 364 aaKnown RBP12.52□□□□□ -0.41
CCDC58-207ENST00000498466 CT45A8P0DMV1 189 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 CT45A9P0DMV2 189 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 IDUAP35475 653 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 ALDH9A1P49189 494 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 GAS1P54826 345 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 CLDN20P56880 219 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 CORO7P57737 925 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 RPS3AP61247 264 aaKnown RBP12.52□□□□□ -0.41
CCDC58-207ENST00000498466 SGCBQ16585 318 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 FAM83EQ2M2I3 478 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 CHRFAM7AQ494W8 412 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 CT45A2Q5DJT8 189 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 FRG2Q64ET8 278 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 C3orf62Q6ZUJ4 267 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 COMMD6Q7Z4G1 85 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 MILR1Q7Z6M3 343 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 METTL4Q8N3J2 472 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 PPM1NQ8N819 430 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 OR5M1Q8NGP8 315 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 TRPC4APQ8TEL6 797 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 GFM2Q969S9 779 aaKnown RBP12.52□□□□□ -0.41
CCDC58-207ENST00000498466 EFHD2Q96C19 240 aaPredicted RBP12.52□□□□□ -0.41
CCDC58-207ENST00000498466 BTBD9Q96Q07 612 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 FRG2BQ96QU4 278 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 STMN4Q9H169 189 aaPredicted RBP12.52□□□□□ -0.41
CCDC58-207ENST00000498466 NOL11Q9H8H0 719 aaKnown RBP12.52□□□□□ -0.41
CCDC58-207ENST00000498466 ANKRA2Q9H9E1 313 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 PFDN4Q9NQP4 134 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 ACOT9Q9Y305 439 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 EMC9Q9Y3B6 208 aa12.52□□□□□ -0.41
CCDC58-207ENST00000498466 TNPO3Q9Y5L0 923 aaKnown RBP12.52□□□□□ -0.41
CCDC58-207ENST00000498466 OR7A17O14581 309 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 NME6O75414 186 aaPredicted RBP12.51□□□□□ -0.41
CCDC58-207ENST00000498466 BCAS2O75934 225 aaPredicted RBP12.51□□□□□ -0.41
CCDC58-207ENST00000498466 PLGP00747 810 aaPredicted RBP12.51□□□□□ -0.41
CCDC58-207ENST00000498466 FCGR2AP12318 317 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 TCP1P17987 556 aaKnown RBP12.51□□□□□ -0.41
CCDC58-207ENST00000498466 EVI2BP34910 448 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 CCNG1P51959 295 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 PNLIPRP2P54317 469 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 IRF9Q00978 393 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 OCRLQ01968 901 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 IFT88Q13099 833 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 GANABQ14697 944 aaKnown RBP12.51□□□□□ -0.41
CCDC58-207ENST00000498466 GUSBP1Q15486 140 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 SGO1Q5FBB7 561 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 ALKBH2Q6NS38 261 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 STAC2Q6ZMT1 411 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 CYS1Q717R9 158 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 CENPLQ8N0S6 344 aaPredicted RBP12.51□□□□□ -0.41
CCDC58-207ENST00000498466 FADS6Q8N9I5 356 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 OR2M3Q8NG83 312 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 OR52B6Q8NGF0 335 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 OR6K3Q8NGY3 331 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 RNF138Q8WVD3 245 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 GTPBP3Q969Y2 492 aaKnown RBP12.51□□□□□ -0.41
CCDC58-207ENST00000498466 CNRIP1Q96F85 164 aaPredicted RBP12.51□□□□□ -0.41
CCDC58-207ENST00000498466 ZBED6CLQ96FA7 236 aaPredicted RBP12.51□□□□□ -0.41
CCDC58-207ENST00000498466 TMEM204Q9BSN7 226 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 FAIM2Q9BWQ8 316 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 PRRG4Q9BZD6 226 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 ACTR6Q9GZN1 396 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 FANCFQ9NPI8 374 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 PLSCR4Q9NRQ2 329 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 MED11Q9P086 117 aa12.51□□□□□ -0.41
CCDC58-207ENST00000498466 CPSF2Q9P2I0 782 aaKnown RBP12.51□□□□□ -0.41
CCDC58-207ENST00000498466 SLC12A4Q9UP95 1085 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms