RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 GUCY1B2O75343 617 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 AQP8O94778 261 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 CBX7O95931 251 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 ATP1B1P05026 303 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 GFAPP14136 432 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 PCSK2P16519 638 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 CSNK2A2P19784 350 aaPredicted RBP10.46□□□□□ -0.73
CDK9-205ENST00000498339 PPICP45877 212 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 EIF1AXP47813 144 aaKnown RBP10.46□□□□□ -0.73
CDK9-205ENST00000498339 CASP9P55211 416 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 CLDN15P56746 228 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 CLDN20P56880 219 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 RAB10P61026 200 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 MAP4K2Q12851 820 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 GANABQ14697 944 aaKnown RBP10.46□□□□□ -0.73
CDK9-205ENST00000498339 CCNYL2Q5T2Q4 361 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 TTC19Q6DKK2 380 aaPredicted RBP10.46□□□□□ -0.73
CDK9-205ENST00000498339 FAM180BQ6P0A1 224 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 PAGE2Q7Z2X7 111 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 TBC1D1Q86TI0 1168 aaPredicted RBP10.46□□□□□ -0.73
CDK9-205ENST00000498339 SLC35A4Q96G79 324 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 GPR22Q99680 433 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 RHNO1Q9BSD3 238 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 C12orf49Q9H741 205 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 FOLH1BQ9HBA9 442 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 LPAR3Q9UBY5 353 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 GDF2Q9UK05 429 aaPredicted RBP10.46□□□□□ -0.73
CDK9-205ENST00000498339 ZNF337Q9Y3M9 751 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 OR10H1Q9Y4A9 318 aa10.46□□□□□ -0.73
CDK9-205ENST00000498339 SVEP1Q4LDE5 3571 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.45□□□□□ -0.746e-7■■■□□ 15.6
CDK9-205ENST00000498339 C1orf226A1L170 272 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 SYCE1LA8MT33 242 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 UBFD1O14562 309 aaKnown RBP10.45□□□□□ -0.74
CDK9-205ENST00000498339 EIF1AYO14602 144 aaKnown RBP10.45□□□□□ -0.74
CDK9-205ENST00000498339 TO15178 435 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 GMFGO60234 142 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 DLX3O60479 287 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 NDUFS7O75251 213 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 SEMA3DO95025 777 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 CDC25BP30305 580 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 EVI2BP34910 448 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 NUDT6P53370 316 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 CORO7P57737 925 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 ERCC6LQ2NKX8 1250 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 CTU2Q2VPK5 515 aaKnown RBP10.45□□□□□ -0.74
CDK9-205ENST00000498339 TRMT12Q53H54 448 aaKnown RBP10.45□□□□□ -0.74
CDK9-205ENST00000498339 LGSNQ5TDP6 509 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 SLC48A1Q6P1K1 146 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 ZNF662Q6ZS27 426 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 BEND4Q6ZU67 534 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 ZBED8Q8IZ13 594 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 ZNF619Q8N2I2 560 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 CEP112Q8N8E3 955 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 KBTBD8Q8NFY9 601 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 OR2M3Q8NG83 312 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 NEUROG1Q92886 237 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 ATP6V1E2Q96A05 226 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 UBXN10Q96LJ8 280 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 ATOH8Q96SQ7 321 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 RBBP8Q99708 897 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 LRRC1Q9BTT6 524 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 MRPL1Q9BYD6 325 aaKnown RBP10.45□□□□□ -0.74
CDK9-205ENST00000498339 ESRP2Q9H6T0 727 aaKnown RBP10.45□□□□□ -0.74
CDK9-205ENST00000498339 PTGES2Q9H7Z7 377 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 LRTM1Q9HBL6 345 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 NMRAL1Q9HBL8 299 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 NGBQ9NPG2 151 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 PLSCR4Q9NRQ2 329 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 AHSPQ9NZD4 102 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 MED11Q9P086 117 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 SENP1Q9P0U3 644 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 PSME2Q9UL46 239 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 RNF11Q9Y3C5 154 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 TSC22D4Q9Y3Q8 395 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 JRKLQ9Y4A0 524 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 ZNF780BQ9Y6R6 833 aa10.45□□□□□ -0.74
CDK9-205ENST00000498339 IGHV4-30-2A0A087WSY4 118 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 FAM234BA2RU67 622 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 OR2M5A3KFT3 312 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 B4DXG7 233 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 LINC01387J3KSC0 135 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 FOXE1O00358 373 aaPredicted RBP10.44□□□□□ -0.74
CDK9-205ENST00000498339 TSPAN2O60636 221 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 UGDHO60701 494 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 SYNGR4O95473 234 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 ESRRBO95718 433 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 FESP07332 822 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 DANCRP0C864 163 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 ZNF16P17020 682 aaPredicted RBP10.44□□□□□ -0.74
CDK9-205ENST00000498339 SRD5A1P18405 259 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 IL32P24001 234 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 GP5P40197 560 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 SLC6A8P48029 635 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 EMDP50402 254 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 MRPS22P82650 360 aaKnown RBP10.44□□□□□ -0.74
CDK9-205ENST00000498339 DUSP2Q05923 314 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 ZNF844Q08AG5 666 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 MGAT2Q10469 447 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 GTF2H2Q13888 395 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms