RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 ECSITQ9BQ95 431 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 ARHGAP9Q9BRR9 750 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 PIF1Q9H611 641 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 ANKRD10Q9NXR5 420 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 ADA2Q9NZK5 511 aa12.53□□□□□ -0.4
CPNE1-227ENST00000498056 YARS2Q9Y2Z4 477 aaKnown RBP12.53□□□□□ -0.4
CPNE1-227ENST00000498056 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.53□□□□□ -0.4
CPNE1-227ENST00000498056 CACNA1GO43497 2377 aa12.52□□□□□ -0.4
CPNE1-227ENST00000498056 DUXAA6NLW8 204 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 MKRN2OSH3BPM6 223 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 NME4O00746 187 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 SLC28A2O43868 658 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 ZNF354AO60765 605 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-227ENST00000498056 REM1O75628 298 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 NUDT7P0C024 238 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 SOX8P57073 446 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 TXNL4AP83876 142 aaKnown RBP12.52□□□□□ -0.41
CPNE1-227ENST00000498056 OC90Q02509 493 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-227ENST00000498056 FUT5Q11128 374 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 BNIP1Q12981 228 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 DECR1Q16698 335 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 EXOSC6Q5RKV6 272 aaKnown RBP12.52□□□□□ -0.41
CPNE1-227ENST00000498056 C8orf82Q6P1X6 216 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-227ENST00000498056 ISLR2Q6UXK2 745 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 IFNEQ86WN2 208 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 BCORP1Q8N888 145 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 FAM13CQ8NE31 585 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 OR5M3Q8NGP4 307 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 OR10A6Q8NH74 314 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 XAGE5Q8WWM1 108 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 MAL2Q969L2 176 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 SLC35A4Q96G79 324 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 HOPXQ9BPY8 73 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-227ENST00000498056 GPATCH1Q9BRR8 931 aaKnown RBP12.52□□□□□ -0.41
CPNE1-227ENST00000498056 BTBD2Q9BX70 525 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 ZNF552Q9H707 407 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-227ENST00000498056 HPF1Q9NWY4 346 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 CMTM6Q9NX76 183 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 GIN1Q9NXP7 522 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 PCDHGB3Q9Y5G1 929 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 NPFFR2Q9Y5X5 522 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 KCNE3Q9Y6H6 103 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 NCKAP5O14513 1909 aa12.52□□□□□ -0.41
CPNE1-227ENST00000498056 PKD1L2Q7Z442 2459 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 LAMA5O15230 3695 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 FAM220BPB1ANY3 271 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 C5orf58C9J3I9 102 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 TO15178 435 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 GYG2O15488 501 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 HNRNPCL1O60812 293 aaKnown RBP12.51□□□□□ -0.41
CPNE1-227ENST00000498056 CEACAM4O75871 244 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 OR6B1O95007 311 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 KCNK2O95069 426 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 AK1P00568 194 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 ITGB2P05107 769 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 NR2F1P10589 423 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 GPX2P18283 190 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 ATP6V1C1P21283 382 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 PIGAP37287 484 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 MAP3K8P41279 467 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 MAGEA8P43361 318 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 PSMD4P55036 377 aaKnown RBP12.51□□□□□ -0.41
CPNE1-227ENST00000498056 PSPHP78330 225 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 ARG2P78540 354 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 MFAP5Q13361 173 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 COL28A1Q2UY09 1125 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 PIGGQ5H8A4 983 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 OPN5Q6U736 354 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 IL20RBQ6UXL0 311 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 OLIG3Q7RTU3 272 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 CYP4Z2PQ8N1L4 340 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 ANKFN1Q8N957 763 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 NFKBIDQ8NI38 313 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 SNRNP27Q8WVK2 155 aaKnown RBP12.51□□□□□ -0.41
CPNE1-227ENST00000498056 SPACA9Q96E40 222 aaPredicted RBP12.51□□□□□ -0.41
CPNE1-227ENST00000498056 TMEM19Q96HH6 336 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 UTP23Q9BRU9 249 aaKnown RBP12.51□□□□□ -0.41
CPNE1-227ENST00000498056 ALG2Q9H553 416 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 KAT8Q9H7Z6 458 aaKnown RBP12.51□□□□□ -0.41
CPNE1-227ENST00000498056 ABCD2Q9UBJ2 740 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 MRTO4Q9UKD2 239 aaKnown RBP12.51□□□□□ -0.41
CPNE1-227ENST00000498056 PACSIN3Q9UKS6 424 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 ANGPT4Q9Y264 503 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 USP24Q9UPU5 2620 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 MGAQ8IWI9 3026 aa12.51□□□□□ -0.41
CPNE1-227ENST00000498056 NPIPA5A0A0B4J1W7 369 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 NPIPA7E9PJI5 369 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 HS6ST1O60243 411 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 TNFRSF21O75509 655 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 PPM1BO75688 479 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 WDPCPO95876 746 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 IGKV1D-16P01601 117 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 FBXO45P0C2W1 286 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 FAM87AP0C7U9 286 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 NPIPA8P0DM63 369 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 ARAFP10398 606 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 CPOXP36551 454 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 CRISP3P54108 245 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 FBXW4P57775 412 aa12.5□□□□□ -0.41
CPNE1-227ENST00000498056 LIPEQ05469 1076 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms