RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 ALOX15BO15296 676 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 LCMT2O60294 686 aaKnown RBP3.62□□□□□ -1.83
VPS36-206ENST00000497149 GJB5O95377 273 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 RRASP10301 218 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 UMPSP11172 480 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 LAMP1P11279 417 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 CCND2P30279 289 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 OR1D4P47884 311 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 HTR5AP47898 357 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 CAMLGP49069 296 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 BPIFB3P59826 476 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 SLC10A1Q14973 349 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 RAB35Q15286 201 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 INAQ16352 499 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 CCDC92Q53HC0 331 aaPredicted RBP3.62□□□□□ -1.83
VPS36-206ENST00000497149 GCNT7Q6ZNI0 430 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 ZSCAN30Q86W11 494 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 CERS5Q8N5B7 392 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 BCORP1Q8N888 145 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 KLHL30-AS1Q8NEE0 82 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 OR52B4Q8NGK2 314 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 VN1R17PQ8TDU5 208 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 TFB1MQ8WVM0 346 aaKnown RBP3.62□□□□□ -1.83
VPS36-206ENST00000497149 ART4Q93070 314 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 MCHR2Q969V1 340 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 PKNOX2Q96KN3 472 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 KAT8Q9H7Z6 458 aaKnown RBP3.62□□□□□ -1.83
VPS36-206ENST00000497149 TRPV5Q9NQA5 729 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 YAE1D1Q9NRH1 226 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 BARX2Q9UMQ3 279 aaPredicted RBP3.62□□□□□ -1.83
VPS36-206ENST00000497149 GRIN2DO15399 1336 aa3.62□□□□□ -1.83
VPS36-206ENST00000497149 FAM230AA0A1W2PPH8 454 aa3.61□□□□□ -1.83
VPS36-206ENST00000497149 G3V3Y1 287 aa3.61□□□□□ -1.83
VPS36-206ENST00000497149 APBB3O95704 486 aa3.61□□□□□ -1.83
VPS36-206ENST00000497149 ALPIP09923 528 aa3.61□□□□□ -1.83
VPS36-206ENST00000497149 PGAM2P15259 253 aa3.61□□□□□ -1.83
VPS36-206ENST00000497149 IDSP22304 550 aa3.61□□□□□ -1.83
VPS36-206ENST00000497149 FNTAP49354 379 aa3.61□□□□□ -1.83
VPS36-206ENST00000497149 PEX6Q13608 980 aa3.61□□□□□ -1.83
VPS36-206ENST00000497149 RFTN1Q14699 578 aaPredicted RBP3.61□□□□□ -1.83
VPS36-206ENST00000497149 Q7L0L9 218 aa3.61□□□□□ -1.83
VPS36-206ENST00000497149 UNC5CLQ8IV45 518 aa3.61□□□□□ -1.83
VPS36-206ENST00000497149 GPD1LQ8N335 351 aa3.61□□□□□ -1.83
VPS36-206ENST00000497149 ADIPOR1Q96A54 375 aa3.61□□□□□ -1.83
VPS36-206ENST00000497149 PPP1R16AQ96I34 528 aa3.61□□□□□ -1.83
VPS36-206ENST00000497149 RPAP3Q9H6T3 665 aaPredicted RBP3.61□□□□□ -1.83
VPS36-206ENST00000497149 ACTR8Q9H981 624 aa3.61□□□□□ -1.83
VPS36-206ENST00000497149 ACTR3BQ9P1U1 418 aa3.61□□□□□ -1.83
VPS36-206ENST00000497149 RSPH14Q9UHP6 348 aa3.61□□□□□ -1.83
VPS36-206ENST00000497149 EXOSC1Q9Y3B2 195 aaKnown RBP3.61□□□□□ -1.83
VPS36-206ENST00000497149 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.61□□□□□ -1.83
VPS36-206ENST00000497149 ANKRD30BLA7E2S9 258 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 A8MX80 341 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 TSC22D2O75157 780 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 TOM1L1O75674 476 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 GSTT2P0CG29 244 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 GSTT2BP0CG30 244 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 CT45A10P0DMU9 189 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 MAGEA9P43362 315 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 ALDH3B2P48448 385 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 KRTAP10-5P60370 271 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 RPS6P62753 249 aaKnown RBP3.6□□□□□ -1.83
VPS36-206ENST00000497149 DPYSQ14117 519 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 ADPRMQ3LIE5 342 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 CYBRD1Q53TN4 286 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 MARC1Q5VT66 337 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 CGB2Q6NT52 195 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 BTNL3Q6UXE8 466 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 UNC5DQ6UXZ4 953 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 LPCAT2Q7L5N7 544 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 Q8N9G6 341 aaPredicted RBP3.6□□□□□ -1.83
VPS36-206ENST00000497149 ANKRD20A12PQ8NF67 263 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 ZPLD1Q8TCW7 415 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 GIPC3Q8TF64 312 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 GTSF1Q8WW33 167 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 HCAR1Q9BXC0 346 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 ECT2Q9H8V3 914 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 VAT1LQ9HCJ6 419 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 MEPEQ9NQ76 525 aaPredicted RBP3.6□□□□□ -1.83
VPS36-206ENST00000497149 ATXN10Q9UBB4 475 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 FOXJ3Q9UPW0 622 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 MGAT4BQ9UQ53 548 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 METP08581 1390 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 NOTCH3Q9UM47 2321 aa3.6□□□□□ -1.83
VPS36-206ENST00000497149 BICDL2A1A5D9 508 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 SLC17A2O00624 439 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 TM9SF1O15321 606 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 TRIM16O95361 564 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 SLC2A10O95528 541 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 ANXA4P09525 319 aaPredicted RBP3.59□□□□□ -1.83
VPS36-206ENST00000497149 SDC1P18827 310 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 FASP25445 335 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 CXCL6P80162 114 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 IL18R1Q13478 541 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 EXOSC2Q13868 293 aaKnown RBP3.59□□□□□ -1.83
VPS36-206ENST00000497149 TFDP1Q14186 410 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 UBE2V2Q15819 145 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 CDKN3Q16667 212 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 UTF1Q5T230 341 aa3.59□□□□□ -1.83
VPS36-206ENST00000497149 LGSNQ5TDP6 509 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms