RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 ANKRD28O15084 1053 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 E2F6O75461 281 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 CSTAP01040 98 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 SSTR4P31391 388 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 C17orf67Q0P5P2 114 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 PDE7AQ13946 482 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 SLC2A7Q6PXP3 512 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 P4HA3Q7Z4N8 544 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 PIGWQ7Z7B1 504 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 SPATA24Q86W54 205 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 ARMC8Q8IUR7 673 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 PGAM4Q8N0Y7 254 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 C17orf47Q8NEP4 570 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 LRRC58Q96CX6 371 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 SPACA9Q96E40 222 aaPredicted RBP8.01□□□□□ -1.13
U2AF1-212ENST00000496462 OMA1Q96E52 524 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 NUDT9Q9BW91 350 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 PRAMEF25A6NGN4 478 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 SCO2O43819 266 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 RASAL1O95294 804 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 PABPC4LP0CB38 370 aaKnown RBP8.01□□□□□ -1.13
U2AF1-212ENST00000496462 OR12D1P0DN82 309 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 ABOP16442 354 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 SLC7A1P30825 629 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 RRM2P31350 389 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 CPA2P48052 419 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 IL1RL1Q01638 556 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 KLRB1Q12918 225 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 CHAF1BQ13112 559 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 OR1C1Q15619 314 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 SGCBQ16585 318 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 ZXDCQ2QGD7 858 aaPredicted RBP8.01□□□□□ -1.13
U2AF1-212ENST00000496462 MFSD12Q6NUT3 480 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 HACD2Q6Y1H2 254 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 MEIOBQ8N635 442 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 OR1J4Q8NGS1 313 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 ANKRD9Q96BM1 317 aaPredicted RBP8.01□□□□□ -1.13
U2AF1-212ENST00000496462 FAM173AQ9BQD7 235 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 THTPAQ9BU02 230 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 ITPAQ9BY32 194 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 MYOTQ9UBF9 498 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 LHX6Q9UPM6 363 aa8.01□□□□□ -1.13
U2AF1-212ENST00000496462 CFAP47Q6ZTR5 3102 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 SHOX2O60902 331 aaPredicted RBP8□□□□□ -1.13
U2AF1-212ENST00000496462 PRKRAO75569 313 aaKnown RBP8□□□□□ -1.13
U2AF1-212ENST00000496462 PPM1BO75688 479 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 SYNGR4O95473 234 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 LINGO3P0C6S8 592 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 GPX3P22352 226 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 PSMA4P25789 261 aaKnown RBP8□□□□□ -1.13
U2AF1-212ENST00000496462 TLE3Q04726 772 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 NNATQ16517 81 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 FAM98BQ52LJ0 330 aaKnown RBP8□□□□□ -1.13
U2AF1-212ENST00000496462 ZNF766Q5HY98 468 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 ZNF311Q5JNZ3 666 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 C1orf146Q5VVC0 180 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 TCTN3Q6NUS6 607 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 LAPTM4BQ86VI4 370 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 APLFQ8IW19 511 aaPredicted RBP8□□□□□ -1.13
U2AF1-212ENST00000496462 BCORP1Q8N888 145 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 SLC38A9Q8NBW4 561 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 CNRIP1Q96F85 164 aaPredicted RBP8□□□□□ -1.13
U2AF1-212ENST00000496462 FCRL1Q96LA6 429 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 ADOQ96SZ5 270 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 EPYCQ99645 322 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 MYLK2Q9H1R3 596 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 KLHL1Q9NR64 748 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 ABCG2Q9UNQ0 655 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 MRPS18BQ9Y676 258 aaKnown RBP8□□□□□ -1.13
U2AF1-212ENST00000496462 LRRK1Q38SD2 2015 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 C9JVG2 144 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 HCRTR2O43614 444 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 GDF1P27539 372 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 MRPL19P49406 292 aaKnown RBP8□□□□□ -1.13
U2AF1-212ENST00000496462 SLC7A2P52569 658 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 IGLV3-21P80748 117 aaPredicted RBP8□□□□□ -1.13
U2AF1-212ENST00000496462 CAMK2BQ13554 666 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 KIAA0040Q15053 153 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 DCST2Q5T1A1 773 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 PRAMEF8Q5VWM4 474 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 PRAMEF7Q5VXH5 474 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 AAGABQ6PD74 315 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 COX15Q7KZN9 410 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 DHFR2Q86XF0 187 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 CLECL1Q8IZS7 167 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 ZNF619Q8N2I2 560 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 OR14L1PQ8NHC6 308 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 C16orf52Q8NHV5 167 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 NEURL3Q96EH8 262 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 NPAS2Q99743 824 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 DMXL2Q8TDJ6 3036 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 CFAP73A6NFT4 308 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 LINC01387J3KSC0 135 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 AKAP8O43823 692 aaKnown RBP8□□□□□ -1.13
U2AF1-212ENST00000496462 DNAJC8O75937 253 aaPredicted RBP8□□□□□ -1.13
U2AF1-212ENST00000496462 BCHEP06276 602 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 COX6A1P12074 109 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 FKBP2P26885 142 aaKnown RBP8□□□□□ -1.13
U2AF1-212ENST00000496462 HTR3AP46098 478 aa8□□□□□ -1.13
U2AF1-212ENST00000496462 ATP12AP54707 1039 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms