RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 MIEF1Q9NQG6 463 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 TAS2R7Q9NYW3 318 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 PCNX3Q9H6A9 2034 aa12.98□□□□□ -0.33
VTI1A-209ENST00000496445 A0A087WV62 115 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 NPIPB8E9PQR5 432 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 UPK1AO00322 258 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 DVL2O14641 736 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 COQ9O75208 318 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 CRCPO75575 148 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 ACTL6AO96019 429 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 CYP4B1P13584 511 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 SRD5A2P31213 254 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 PNLIPRP2P54317 469 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 PSPHP78330 225 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 EFR3AQ14156 821 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 FBXL19-AS1Q494R0 122 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 IKBIPQ70UQ0 350 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 TMEM200AQ86VY9 491 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 PLCZ1Q86YW0 608 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 OR2L13Q8N349 312 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 C9orf106Q8NAJ2 232 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 OR2T11Q8NH01 316 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 OR2W6PQ8NHA6 318 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 OR14L1PQ8NHC6 308 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 NRGNQ92686 78 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 EGLN2Q96KS0 407 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 FCRL1Q96LA6 429 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 AMDHD1Q96NU7 426 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 TUBA1CQ9BQE3 449 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 GATA5Q9BWX5 397 aaPredicted RBP12.97□□□□□ -0.33
VTI1A-209ENST00000496445 TUBB1Q9H4B7 451 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 MKS1Q9NXB0 559 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 TAS2R9Q9NYW1 312 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 FLRT3Q9NZU0 649 aa12.97□□□□□ -0.33
VTI1A-209ENST00000496445 ZNF629Q9UEG4 869 aaPredicted RBP12.97□□□□□ -0.33
VTI1A-209ENST00000496445 C19orf53Q9UNZ5 99 aaPredicted RBP12.97□□□□□ -0.33
VTI1A-209ENST00000496445 SYT5O00445 386 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 PLOD2O00469 737 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 SLITRK5O94991 958 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 IL2RAP01589 272 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 GRK2P25098 689 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 NTSP30990 170 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 UQCRC1P31930 480 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 EVI2BP34910 448 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 LHX2P50458 406 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 AGFG1P52594 562 aaKnown RBP12.96□□□□□ -0.33
VTI1A-209ENST00000496445 CES4AQ5XG92 561 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 KANK2Q63ZY3 851 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 OR5M10Q6IEU7 315 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 PLXDC2Q6UX71 529 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 RNF165Q6ZSG1 346 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 Q6ZSR9 355 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 ADGRE4PQ86SQ3 457 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 IFNEQ86WN2 208 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 ZZZ3Q8IYH5 903 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 ZPLD1Q8TCW7 415 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 APOPT1Q96IL0 206 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 CALHM2Q9HA72 323 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 SLC24A3Q9HC58 644 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 RRAGDQ9NQL2 400 aaPredicted RBP12.96□□□□□ -0.33
VTI1A-209ENST00000496445 TAS2R10Q9NYW0 307 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 CRIM1Q9NZV1 1036 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 WBP11Q9Y2W2 641 aaKnown RBP12.96□□□□□ -0.33
VTI1A-209ENST00000496445 OR10H1Q9Y4A9 318 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 ITPR3Q14573 2671 aa12.96□□□□□ -0.33
VTI1A-209ENST00000496445 AKAP6Q13023 2319 aa12.96□□□□□ -0.34
VTI1A-209ENST00000496445 TMEM233B4DJY2 109 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 AZIN1O14977 448 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 SEC22BO75396 215 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 ZWINTO95229 277 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 CPN1P15169 458 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 SDC1P18827 310 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 KRT20P35900 424 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 STARP49675 285 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 CLDN18P56856 261 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 B3GALT5-AS1P59052 145 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 VSNL1P62760 191 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 FOXF2Q12947 444 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 SF3B4Q15427 424 aaKnown RBP eCLIP12.95□□□□□ -0.34
VTI1A-209ENST00000496445 ZNF385BQ569K4 471 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 SH2D4BQ5SQS7 431 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 ANKRD26P1Q6NSI1 321 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 TRABD2AQ86V40 505 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 TRIM42Q8IWZ5 723 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 FADS6Q8N9I5 356 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 BANPQ8N9N5 519 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.95□□□□□ -0.34
VTI1A-209ENST00000496445 RNASE6Q93091 150 aaKnown RBP12.95□□□□□ -0.34
VTI1A-209ENST00000496445 GFM2Q969S9 779 aaKnown RBP12.95□□□□□ -0.34
VTI1A-209ENST00000496445 CIDECQ96AQ7 238 aaPredicted RBP12.95□□□□□ -0.34
VTI1A-209ENST00000496445 ELP4Q96EB1 424 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 METTL2AQ96IZ6 378 aaKnown RBP12.95□□□□□ -0.34
VTI1A-209ENST00000496445 LMF2Q9BU23 707 aaKnown RBP12.95□□□□□ -0.34
VTI1A-209ENST00000496445 RTN4RQ9BZR6 473 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 LRTM1Q9HBL6 345 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 DDX18Q9NVP1 670 aaKnown RBP12.95□□□□□ -0.34
VTI1A-209ENST00000496445 C1orf109Q9NX04 203 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 JKAMPQ9P055 326 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 CLCF1Q9UBD9 225 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 MID2Q9UJV3 735 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms