RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 PIRO00625 290 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 PTGESO14684 152 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 FFAR2O15552 330 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 SUSD5O60279 629 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 PRAMEF2O60811 474 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 TOXO94900 526 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 GASTP01350 101 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 ETV5P41161 510 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 MADCAM1Q13477 382 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 SYTL3Q4VX76 610 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 KIAA1211LQ6NV74 962 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 NCEH1Q6PIU2 408 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 ALKAL2Q6UX46 152 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 TMIGD1Q6UXZ0 262 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 USP53Q70EK8 1073 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 TMEM173Q86WV6 379 aaPredicted RBP8.55□□□□□ -1.04
HPS4-217ENST00000496385 OR52J3Q8NH60 311 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 ELP4Q96EB1 424 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 TRMT2BQ96GJ1 504 aaKnown RBP8.55□□□□□ -1.04
HPS4-217ENST00000496385 C12orf66Q96MD2 445 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 NMNAT1Q9HAN9 279 aaPredicted RBP8.55□□□□□ -1.04
HPS4-217ENST00000496385 NT5MQ9NPB1 228 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 NANSQ9NR45 359 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 TLR8Q9NR97 1041 aaKnown RBP8.55□□□□□ -1.04
HPS4-217ENST00000496385 FZD4Q9ULV1 537 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 ENTPD4Q9Y227 616 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 FNDC3AQ9Y2H6 1198 aaKnown RBP8.55□□□□□ -1.04
HPS4-217ENST00000496385 PRG3Q9Y2Y8 225 aaPredicted RBP8.55□□□□□ -1.04
HPS4-217ENST00000496385 ENPP4Q9Y6X5 453 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 OR2M5A3KFT3 312 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 LINC01553A4QN01 128 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 NAP1L6A6NFF2 107 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 ARGFXA6NJG6 315 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 PPEF2O14830 753 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 EEF1E1O43324 174 aaKnown RBP8.55□□□□□ -1.04
HPS4-217ENST00000496385 EOMESO95936 686 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 SERPINA3P01011 423 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 HIST1H2ABP04908 130 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 IFNGR1P15260 489 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 ATP5A1P25705 553 aaKnown RBP8.55□□□□□ -1.04
HPS4-217ENST00000496385 CHI3L1P36222 383 aaPredicted RBP8.55□□□□□ -1.04
HPS4-217ENST00000496385 PTPN5P54829 565 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 CAV3P56539 151 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 ITKQ08881 620 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 VASNQ6EMK4 673 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 ZNF425Q6IV72 752 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 KIAA1161Q6NSJ0 714 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 PAQR9Q6ZVX9 377 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 HIST3H2AQ7L7L0 130 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 ARL6IP6Q8N6S5 226 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 TOP6BLQ8N6T0 577 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 OR6K3Q8NGY3 331 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 HIST1H2ACQ93077 130 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 TIFAQ96CG3 184 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 PAPOLGQ9BWT3 736 aaKnown RBP8.55□□□□□ -1.04
HPS4-217ENST00000496385 PIGMQ9H3S5 423 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 CDCP1Q9H5V8 836 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 NSUN3Q9H649 340 aaKnown RBP8.55□□□□□ -1.04
HPS4-217ENST00000496385 BRD9Q9H8M2 597 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 SLC6A20Q9NP91 592 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 NIT2Q9NQR4 276 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 PIPOXQ9P0Z9 390 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 UXTQ9UBK9 157 aaPredicted RBP8.55□□□□□ -1.04
HPS4-217ENST00000496385 MSRAQ9UJ68 235 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 KCND3Q9UK17 655 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 ACSL6Q9UKU0 697 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 DLGAP4Q9Y2H0 992 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 CHST2Q9Y4C5 530 aa8.55□□□□□ -1.04
HPS4-217ENST00000496385 NYNRINQ9P2P1 1898 aaKnown RBP8.55□□□□□ -1.04
HPS4-217ENST00000496385 RAB19A4D1S5 217 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 TRAPPC13A5PLN9 417 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 EPOPA6NHQ4 379 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 GABRR3A8MPY1 467 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 HEPACAM2A8MVW5 462 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 NEDD8-MDP1E9PL57 170 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 CTDSPLO15194 276 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 GSTZ1O43708 216 aaPredicted RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 BEST1O76090 585 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 UBL3O95164 117 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 SRPRAP08240 638 aaKnown RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 TFPIP10646 304 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 SELLP14151 372 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 SDC1P18827 310 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 HTRA4P83105 476 aaPredicted RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 DSC2Q02487 901 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 SOX4Q06945 474 aaPredicted RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 BOP1Q14137 746 aaKnown RBP8.54□□□□□ -1.04
HPS4-217ENST00000496385 KRT33BQ14525 404 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 RGNQ15493 299 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 SV2CQ496J9 727 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 LIN54Q6MZP7 749 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 SLC30A6Q6NXT4 461 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 PAQR6Q6TCH4 344 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 SBSNQ6UWP8 590 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 MARCH9Q86YJ5 346 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 GPR135Q8IZ08 494 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 ZNF687Q8N1G0 1237 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 UMODL1-AS1Q8N2C9 162 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 CPXM2Q8N436 756 aa8.54□□□□□ -1.04
HPS4-217ENST00000496385 ZNF527Q8NB42 609 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms