RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 SLC1A6P48664 564 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 TRPC1P48995 793 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 PNLIPRP2P54317 469 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 NUP107P57740 925 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 PSPHP78330 225 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 RPP38P78345 283 aaKnown RBP11.24□□□□□ -0.61
TRIM59-207ENST00000496222 CRYZQ08257 329 aaKnown RBP11.24□□□□□ -0.61
TRIM59-207ENST00000496222 HSPB3Q12988 150 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 PTGR1Q14914 329 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 MLC1Q15049 377 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 CYP27C1Q4G0S4 372 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 NHSL2Q5HYW2 709 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 IL23RQ5VWK5 629 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 LARP4Q71RC2 724 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRIM59-207ENST00000496222 CROCCP2Q86T23 111 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 LIX1Q8N485 282 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 OR7A2PQ8NGA2 310 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 SARAFQ96BY9 339 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 TTYH2Q9BSA4 534 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 C1orf50Q9BV19 199 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 OSBPL11Q9BXB4 747 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 RTN4RQ9BZR6 473 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 LDAHQ9H6V9 325 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 METTL7AQ9H8H3 244 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 DDX18Q9NVP1 670 aaKnown RBP11.24□□□□□ -0.61
TRIM59-207ENST00000496222 FLRT3Q9NZU0 649 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 SH3BP4Q9P0V3 963 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.24□□□□□ -0.61
TRIM59-207ENST00000496222 PCDHGB3Q9Y5G1 929 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 ARHGAP21Q5T5U3 1957 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 PDZD2O15018 2839 aa11.24□□□□□ -0.61
TRIM59-207ENST00000496222 PKDREJQ9NTG1 2253 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 C17orf51A8MQB3 221 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 FADS1O60427 444 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 CLDN14O95500 239 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 IGKV1D-16P01601 117 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 GLI4P10075 376 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 LAMP1P11279 417 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 PRPS2P11908 318 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 CYP4B1P13584 511 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 PRF1P14222 555 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 EFNA1P20827 205 aaPredicted RBP11.23□□□□□ -0.61
TRIM59-207ENST00000496222 GRK2P25098 689 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 ELAVL4P26378 380 aaKnown RBP11.23□□□□□ -0.61
TRIM59-207ENST00000496222 SLC18A1P54219 525 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 C21orf58P58505 322 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 EMX2Q04743 252 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 BST1Q10588 318 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 PMPCAQ10713 525 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 ZNF155Q12901 538 aaPredicted RBP11.23□□□□□ -0.61
TRIM59-207ENST00000496222 SMU1Q2TAY7 513 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 ATP6AP1LQ52LC2 224 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 EIPR1Q53HC9 387 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 VASNQ6EMK4 673 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 TMEM211Q6ICI0 200 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 ANGPTL8Q6UXH0 198 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 SEM1Q6ZVN7 128 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 EID3Q8N140 333 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 KRTCAP2Q8N6L1 136 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 FAM83FQ8NEG4 500 aaPredicted RBP11.23□□□□□ -0.61
TRIM59-207ENST00000496222 OR1J4Q8NGS1 313 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 PSMA8Q8TAA3 256 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 EFHD2Q96C19 240 aaPredicted RBP11.23□□□□□ -0.61
TRIM59-207ENST00000496222 COQ8BQ96D53 544 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 TMCO6Q96DC7 493 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 ZBED6CLQ96FA7 236 aaPredicted RBP11.23□□□□□ -0.61
TRIM59-207ENST00000496222 TIMP4Q99727 224 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 AKTIPQ9H8T0 292 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 TMBIM4Q9HC24 238 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 KCNK9Q9NPC2 374 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 ASIC5Q9NY37 505 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 B4GALT7Q9UBV7 327 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 ACAD8Q9UKU7 415 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 CBLCQ9ULV8 474 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 RNF6Q9Y252 685 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 RAP2CQ9Y3L5 183 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 HCFC1P51610 2035 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 ABCA12Q86UK0 2595 aa11.23□□□□□ -0.61
TRIM59-207ENST00000496222 GXYLT2A0PJZ3 443 aa11.22□□□□□ -0.61
TRIM59-207ENST00000496222 TMEM120BA0PK00 339 aa11.22□□□□□ -0.61
TRIM59-207ENST00000496222 FIGNL2A6NMB9 653 aa11.22□□□□□ -0.61
TRIM59-207ENST00000496222 KDM4EB2RXH2 506 aaPredicted RBP11.22□□□□□ -0.61
TRIM59-207ENST00000496222 WDR1O75083 606 aa11.22□□□□□ -0.61
TRIM59-207ENST00000496222 TRAPPC6AO75865 159 aa11.22□□□□□ -0.61
TRIM59-207ENST00000496222 NKX2-2O95096 273 aa11.22□□□□□ -0.61
TRIM59-207ENST00000496222 SNUPNO95149 360 aaKnown RBP11.22□□□□□ -0.61
TRIM59-207ENST00000496222 IL33O95760 270 aa11.22□□□□□ -0.61
TRIM59-207ENST00000496222 G6PDP11413 515 aa11.22□□□□□ -0.61
TRIM59-207ENST00000496222 MAPK1P28482 360 aa11.22□□□□□ -0.61
TRIM59-207ENST00000496222 ADH7P40394 386 aa11.22□□□□□ -0.61
TRIM59-207ENST00000496222 KIR3DL1P43629 444 aa11.22□□□□□ -0.61
TRIM59-207ENST00000496222 MASP1P48740 699 aa11.22□□□□□ -0.61
TRIM59-207ENST00000496222 RPL14P50914 215 aaKnown RBP11.22□□□□□ -0.61
TRIM59-207ENST00000496222 MANFP55145 182 aaKnown RBP11.22□□□□□ -0.61
TRIM59-207ENST00000496222 TFF3Q07654 80 aa11.22□□□□□ -0.61
TRIM59-207ENST00000496222 STX3Q13277 289 aa11.22□□□□□ -0.61
TRIM59-207ENST00000496222 EFR3AQ14156 821 aa11.22□□□□□ -0.61
TRIM59-207ENST00000496222 PDCD2Q16342 344 aaPredicted RBP11.22□□□□□ -0.61
TRIM59-207ENST00000496222 WIPI1Q5MNZ9 446 aaPredicted RBP11.22□□□□□ -0.61
TRIM59-207ENST00000496222 DCST1Q5T197 706 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms