RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 SCG5P05408 212 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 HIST1H2AGP0C0S8 130 aaPredicted RBP8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 RHOXF2BP0C7M4 288 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 FCGR2AP12318 317 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 HIST1H2ADP20671 130 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 PCMT1P22061 227 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 CERS1P27544 350 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 HPDP32754 393 aaPredicted RBP8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 MARCKSL1P49006 195 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 PLA2G16P53816 162 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 EEFSECP57772 596 aaKnown RBP8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 PHC1P78364 1004 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 BSPH1Q075Z2 132 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 SP140Q13342 867 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 DOC2AQ14183 400 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 IQCCQ4KMZ1 466 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 FAM209BQ5JX69 171 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 SLC35F1Q5T1Q4 408 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 HLA-DQA1Q5Y7H0 255 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 GTF2IRD2BQ6EKJ0 949 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 BEND4Q6ZU67 534 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 TMPRSS11BQ86T26 416 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 PEG10Q86TG7 708 aaKnown RBP8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 GTF2IRD2Q86UP8 949 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 STK32CQ86UX6 486 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 CPNE9Q8IYJ1 553 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 OR8K1Q8NGG5 319 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 OR6K3Q8NGY3 331 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 KCTD4Q8WVF5 259 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 NEIL2Q969S2 332 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 S100PBPQ96BU1 408 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 MS4A6EQ96DS6 147 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 HIST1H2AHQ96KK5 128 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 JMJD8Q96S16 334 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 HIST1H2AJQ99878 128 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 H2AFJQ9BTM1 129 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 OSBPL11Q9BXB4 747 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 PINK1Q9BXM7 581 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 AICDAQ9GZX7 198 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 HSD3B7Q9H2F3 369 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 PELI2Q9HAT8 420 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 KLRF1Q9NZS2 232 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 DKKL1Q9UK85 242 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 PDE10AQ9Y233 779 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 MAD1L1Q9Y6D9 718 aa8.57□□□□□ -1.04
SMARCAL1-213ENST00000496037 C2orf92A0A1B0GVN3 265 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 GOLGA6L9A6NEM1 432 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 OR6C76A6NM76 312 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 VGLL3A8MV65 326 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 GOLGA8KD6RF30 607 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 GOLGA8TH3BQL2 631 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 NDUFS8O00217 210 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 KCNH1O95259 989 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 PLGP00747 810 aaPredicted RBP8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 GHRHP01286 108 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 PROCP04070 461 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 C8GP07360 202 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 PSMB1P20618 241 aaKnown RBP8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 HNRNPH1P31943 449 aaKnown RBP8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 LSP1P33241 339 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 GRIA1P42261 906 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 NR4A2P43354 598 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 PDLIM4P50479 330 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 MECP2P51608 486 aaKnown RBP8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 EFNA4P52798 201 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 CTBP2P56545 445 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 C21orf58P58505 322 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 RPS13P62277 151 aaKnown RBP8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 HERVK_113P63132 956 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 ERVK-8P63133 956 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 LGALS3BPQ08380 585 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 PON3Q15166 354 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 CNN3Q15417 329 aaKnown RBP8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 BCL2A1Q16548 175 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 PCID2Q5JVF3 399 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 DUPD1Q68J44 220 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 LRRC8EQ6NSJ5 796 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 SLC30A6Q6NXT4 461 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 CYHR1Q6ZMK1 362 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 TTLQ8NG68 377 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 FNDC9Q8TBE3 224 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 KCNJ9Q92806 393 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 OR4K3Q96R72 315 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 ERVK-6Q9BXR3 956 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 STMN4Q9H169 189 aaPredicted RBP8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 PARVBQ9HBI1 364 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 TREX1Q9NSU2 369 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 CBLN4Q9NTU7 201 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 MRGBPQ9NV56 204 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 ANO10Q9NW15 660 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 OXSMQ9NWU1 459 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 CGGBP1Q9UFW8 167 aaPredicted RBP8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 SOX13Q9UN79 622 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 EXO1Q9UQ84 846 aaKnown RBP8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 ERVK-19Q9WJR5 959 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 ZNF175Q9Y473 711 aa8.56□□□□□ -1.04
SMARCAL1-213ENST00000496037 IGHV4-61A0A0C4DH41 118 aa8.55□□□□□ -1.04
SMARCAL1-213ENST00000496037 PRAMEF27A3QJZ7 478 aa8.55□□□□□ -1.04
SMARCAL1-213ENST00000496037 LRIT2A6NDA9 550 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms