RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 DSCR3O14972 297 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 SLC16A6O15403 523 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 PRAMEF2O60811 474 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 CCNB2O95067 398 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 SNAP29O95721 258 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 CLPTM1O96005 669 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 C1QCP02747 245 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 GUSBP08236 651 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 PABPC4LP0CB38 370 aaKnown RBP9.57□□□□□ -0.88
HDAC3-214ENST00000495485 ITGAMP11215 1152 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 MYF5P13349 255 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 TNNI3P19429 210 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 CD247P20963 164 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 ALAS2P22557 587 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 RBMS1P29558 406 aaKnown RBP9.57□□□□□ -0.88
HDAC3-214ENST00000495485 PRKAR1BP31321 381 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 IFNGR2P38484 337 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 XCR1P46094 333 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 CDH12P55289 794 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 CSNK2BP67870 215 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 POU6F2P78424 691 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-214ENST00000495485 IGLV3-21P80748 117 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-214ENST00000495485 IL1RL1Q01638 556 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 CAMK2BQ13554 666 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 KEAP1Q14145 624 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 IL11RAQ14626 422 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 MICAQ29983 383 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 PRICKLE4Q2TBC4 344 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 KCTD21Q4G0X4 260 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 ZNF311Q5JNZ3 666 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 RBM48Q5RL73 367 aaKnown RBP9.57□□□□□ -0.88
HDAC3-214ENST00000495485 SNAP47Q5SQN1 464 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 PHF19Q5T6S3 580 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 KDM4DQ6B0I6 523 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 TBPL2Q6SJ96 375 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 TTLL10Q6ZVT0 673 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 RAB11FIP2Q7L804 512 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 THAP5Q7Z6K1 395 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 SMYD1Q8NB12 490 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 CHDHQ8NE62 594 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-214ENST00000495485 OR5T3Q8NGG3 340 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 OR51Q1Q8NH59 317 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 ANKRD9Q96BM1 317 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-214ENST00000495485 OTUB1Q96FW1 271 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-214ENST00000495485 PSD2Q9BQI7 771 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 NUDT22Q9BRQ3 303 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 YIPF4Q9BSR8 244 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 FNDC11Q9BVV2 318 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 DDA1Q9BW61 102 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 YIPF2Q9BWQ6 316 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 TMEM121BQ9BXQ6 578 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-214ENST00000495485 POLR2J2Q9GZM3 115 aaKnown RBP9.57□□□□□ -0.88
HDAC3-214ENST00000495485 SPRTNQ9H040 489 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-214ENST00000495485 POLR2J3Q9H1A7 115 aaKnown RBP9.57□□□□□ -0.88
HDAC3-214ENST00000495485 TOR3AQ9H497 397 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 SMURF2Q9HAU4 748 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 ZNF304Q9HCX3 659 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 VCX3AQ9NNX9 186 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 ADAP2Q9NPF8 381 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 KRCC1Q9NPI7 259 aaPredicted RBP9.57□□□□□ -0.88
HDAC3-214ENST00000495485 FBXO8Q9NRD0 319 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 MAT2BQ9NZL9 334 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 HCN3Q9P1Z3 774 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 PRODH2Q9UF12 536 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 MRTO4Q9UKD2 239 aaKnown RBP9.57□□□□□ -0.88
HDAC3-214ENST00000495485 WDR45Q9Y484 360 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 TESMINQ9Y4I5 508 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 PCDHGA3Q9Y5H0 932 aa9.57□□□□□ -0.88
HDAC3-214ENST00000495485 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 LOC100130705A0A1B0GUX0 176 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 A0A1B0GX78 115 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 A8MU76 341 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 FAM227AF5H4B4 570 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 FAAHO00519 579 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 AP3D1O14617 1153 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 B4GALT2O60909 372 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 LGI1O95970 557 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 IFNA16P05015 189 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 DBIP07108 87 aaKnown RBP9.56□□□□□ -0.88
HDAC3-214ENST00000495485 H1F0P07305 194 aaKnown RBP9.56□□□□□ -0.88
HDAC3-214ENST00000495485 THBS1P07996 1170 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 JMJD7P0C870 316 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 IL7RP16871 459 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 FBLP22087 321 aaKnown RBP9.56□□□□□ -0.88
HDAC3-214ENST00000495485 CSF2RBP32927 897 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 RYKP34925 604 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 RPL5P46777 297 aaKnown RBP9.56□□□□□ -0.88
HDAC3-214ENST00000495485 STT3AP46977 705 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 OR1E2P47887 323 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 MAN2A2P49641 1150 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 PDX1P52945 283 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 PSMD4P55036 377 aaKnown RBP9.56□□□□□ -0.88
HDAC3-214ENST00000495485 ESRRGP62508 458 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 TUBA4AP68366 448 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 DUSP2Q05923 314 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 ZNF155Q12901 538 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-214ENST00000495485 KCNAB2Q13303 367 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 DSG2Q14126 1118 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 LTB4RQ15722 352 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 DUSP7Q16829 419 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms