RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 PRB2P02812 416 aaPredicted RBP12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 APRTP07741 180 aa12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 GRK2P25098 689 aa12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 GIFP27352 417 aa12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 GSTM2P28161 218 aa12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 PTPN7P35236 360 aa12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 RGS4P49798 205 aa12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 AP1S2P56377 157 aa12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 MAP4K2Q12851 820 aa12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 ITGADQ13349 1161 aa12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 SPA17Q15506 151 aa12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 TMEM108Q6UXF1 575 aa12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 C1orf229Q6ZS94 237 aaPredicted RBP12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 GGNQ86UU5 652 aa12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 CCDC170Q8IYT3 715 aa12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 TANKQ92844 425 aa12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 UBE2FQ969M7 185 aa12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 FBXO17Q96EF6 278 aa12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 INPP5KQ9BT40 448 aa12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 ROGDIQ9GZN7 287 aa12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 GLRX2Q9NS18 164 aa12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 ACSS1Q9NUB1 689 aaPredicted RBP12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 TRMT6Q9UJA5 497 aaKnown RBP12.78□□□□□ -0.36
CHMP2B-205ENST00000494980 EIF1AYO14602 144 aaKnown RBP12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 H2AFYO75367 372 aaKnown RBP12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 LYZL6O75951 148 aa12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 CLDN9O95484 217 aa12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 STAMBPO95630 424 aa12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 HIST1H1TP22492 207 aaPredicted RBP12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 CTNNA1P35221 906 aaKnown RBP12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 FDFT1P37268 417 aa12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 BUD31P41223 144 aaPredicted RBP12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 ACAP2Q15057 778 aa12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 C18orf63Q68DL7 685 aa12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 NEPROQ6NW34 567 aa12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 AADACL2Q6P093 401 aa12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 GBP7Q8N8V2 638 aaPredicted RBP12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 ANKRD7Q92527 254 aa12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 TAF15Q92804 592 aaKnown RBP eCLIP12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 LINGO1Q96FE5 620 aa12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 DUX5Q96PT3 197 aa12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 VRK1Q99986 396 aaPredicted RBP12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 IL22Q9GZX6 179 aa12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 CXorf21Q9HAI6 301 aa12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 MCTS1Q9ULC4 181 aaKnown RBP12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 ATP23Q9Y6H3 246 aa12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 NOTCH3Q9UM47 2321 aa12.77□□□□□ -0.37
CHMP2B-205ENST00000494980 WASHC1A8K0Z3 465 aa12.76□□□□□ -0.37
CHMP2B-205ENST00000494980 M0QZ24 198 aa12.76□□□□□ -0.37
CHMP2B-205ENST00000494980 TJP3O95049 919 aa12.76□□□□□ -0.37
CHMP2B-205ENST00000494980 GPR75O95800 540 aa12.76□□□□□ -0.37
CHMP2B-205ENST00000494980 CT62P0C5K7 136 aa12.76□□□□□ -0.37
CHMP2B-205ENST00000494980 C1GALT1C1LP0DN25 315 aa12.76□□□□□ -0.37
CHMP2B-205ENST00000494980 CD40P25942 277 aa12.76□□□□□ -0.37
CHMP2B-205ENST00000494980 ZNF83P51522 516 aa12.76□□□□□ -0.37
CHMP2B-205ENST00000494980 TNFRSF17Q02223 184 aa12.76□□□□□ -0.37
CHMP2B-205ENST00000494980 SLCO4C1Q6ZQN7 724 aa12.76□□□□□ -0.37
CHMP2B-205ENST00000494980 NUFIP2Q7Z417 695 aaKnown RBP12.76□□□□□ -0.37
CHMP2B-205ENST00000494980 DENND6AQ8IWF6 608 aa12.76□□□□□ -0.37
CHMP2B-205ENST00000494980 OR52B6Q8NGF0 335 aa12.76□□□□□ -0.37
CHMP2B-205ENST00000494980 LRRC37BQ96QE4 947 aa12.76□□□□□ -0.37
CHMP2B-205ENST00000494980 TBCDQ9BTW9 1192 aa12.76□□□□□ -0.37
CHMP2B-205ENST00000494980 KIFC1Q9BW19 673 aa12.76□□□□□ -0.37
CHMP2B-205ENST00000494980 CORO1CQ9ULV4 474 aaPredicted RBP12.76□□□□□ -0.37
CHMP2B-205ENST00000494980 A0A1W2PS29 197 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 SCAMP2O15127 329 aaKnown RBP12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 SCELO95171 688 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 SYNGR4O95473 234 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 MDKP21741 143 aaPredicted RBP12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 PTAFRP25105 342 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 APOBEC3AP31941 199 aaPredicted RBP12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 GALNSP34059 522 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 SSR2P43308 183 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 RWDD2BP57060 319 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 TBX2Q13207 712 aaPredicted RBP12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 SWI5Q1ZZU3 235 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 MST1LQ2TV78 715 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 FAHD2BQ6P2I3 314 aaPredicted RBP12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 SLC46A3Q7Z3Q1 461 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 GALNT10Q86SR1 603 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 KRT78Q8N1N4 520 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 SPATA6LQ8N4H0 392 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 OR10D3Q8NH80 312 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 TMCO6Q96DC7 493 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 FAHD2AQ96GK7 314 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 ITPAQ9BY32 194 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 TRIM54Q9BYV2 358 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 DSN1Q9H410 356 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 ZBTB26Q9HCK0 441 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 MYNNQ9NPC7 610 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 RAB6BQ9NRW1 208 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 AP4B1Q9Y6B7 739 aa12.75□□□□□ -0.37
CHMP2B-205ENST00000494980 TENM2Q9NT68 2774 aa12.74□□□□□ -0.37
CHMP2B-205ENST00000494980 GLOD5A6NK44 160 aa12.74□□□□□ -0.37
CHMP2B-205ENST00000494980 SH3BGRLO75368 114 aa12.74□□□□□ -0.37
CHMP2B-205ENST00000494980 IPO7O95373 1038 aaKnown RBP12.74□□□□□ -0.37
CHMP2B-205ENST00000494980 SLU7O95391 586 aaKnown RBP12.74□□□□□ -0.37
CHMP2B-205ENST00000494980 AVPP01185 164 aa12.74□□□□□ -0.37
CHMP2B-205ENST00000494980 MSMBP08118 114 aa12.74□□□□□ -0.37
CHMP2B-205ENST00000494980 GNAZP19086 355 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms