RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 DMRTC2Q8IXT2 367 aaPredicted RBP8.05□□□□□ -1.12
ITGB1-217ENST00000494395 PRR22Q8IZ63 422 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 TAGAPQ8N103 731 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 FBXW8Q8N3Y1 598 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 KRTCAP2Q8N6L1 136 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 OR10G3Q8NGC4 313 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 PSMA8Q8TAA3 256 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 SPPL2AQ8TCT8 520 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 RNF138Q8WVD3 245 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 PPCDCQ96CD2 204 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 COQ8BQ96D53 544 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 HSPBAP1Q96EW2 488 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 ZBED6CLQ96FA7 236 aaPredicted RBP8.05□□□□□ -1.12
ITGB1-217ENST00000494395 LCORQ96JN0 433 aaPredicted RBP8.05□□□□□ -1.12
ITGB1-217ENST00000494395 MAELQ96JY0 434 aaKnown RBP8.05□□□□□ -1.12
ITGB1-217ENST00000494395 PPP1R36Q96LQ0 422 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 GPR137Q96N19 417 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 SECISBP2Q96T21 854 aaKnown RBP8.05□□□□□ -1.12
ITGB1-217ENST00000494395 FAM173AQ9BQD7 235 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 ZDHHC11Q9H8X9 412 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 SACM1LQ9NTJ5 587 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 NOP53Q9NZM5 478 aaKnown RBP8.05□□□□□ -1.12
ITGB1-217ENST00000494395 PRODH2Q9UF12 536 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 ZNF835Q9Y2P0 537 aa8.05□□□□□ -1.12
ITGB1-217ENST00000494395 RP1L1Q8IWN7 2480 aaPredicted RBP8.05□□□□□ -1.12
ITGB1-217ENST00000494395 FLNCQ14315 2725 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 G3V3Y1 287 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 ADAM10O14672 748 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 HDAC3O15379 428 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 ASNA1O43681 348 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 TSPAN2O60636 221 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 COQ9O75208 318 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 SEMA7AO75326 666 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 TRIM3O75382 744 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-217ENST00000494395 ERN1O75460 977 aaKnown RBP8.04□□□□□ -1.12
ITGB1-217ENST00000494395 PPM1BO75688 479 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 P04436 131 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 RNF224P0DH78 156 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 LAMP1P11279 417 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 ZNF24P17028 368 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 NAGAP17050 411 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 LBPP18428 481 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 PRPS1L1P21108 318 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 HPCAL1P37235 193 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 PIGAP37287 484 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 RPL3P39023 403 aaKnown RBP8.04□□□□□ -1.12
ITGB1-217ENST00000494395 PTGDSP41222 190 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 DNASE1L1P49184 302 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 TMED10P49755 219 aaKnown RBP8.04□□□□□ -1.12
ITGB1-217ENST00000494395 CDK9P50750 372 aaKnown RBP8.04□□□□□ -1.12
ITGB1-217ENST00000494395 NRG3P56975 720 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 CORO7P57737 925 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 HSPB3Q12988 150 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 KRTCAP3Q53RY4 240 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 PRAMEF20Q5VT98 475 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 FNDC7Q5VTL7 733 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 BICRALQ6AI39 1079 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 BNC2Q6ZN30 1099 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-217ENST00000494395 Q6ZPB1 254 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-217ENST00000494395 GK5Q6ZS86 529 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 R3HCC1LQ7Z5L2 792 aaKnown RBP8.04□□□□□ -1.12
ITGB1-217ENST00000494395 SLC34A3Q8N130 599 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 FAM13CQ8NE31 585 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 OMA1Q96E52 524 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 GIMAP5Q96F15 307 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 C7orf26Q96N11 449 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 TTTY12Q9BZ98 90 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 DDX18Q9NVP1 670 aaKnown RBP8.04□□□□□ -1.12
ITGB1-217ENST00000494395 TUBA8Q9NY65 449 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-217ENST00000494395 TAS2R9Q9NYW1 312 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 CNIH4Q9P003 139 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 SH3BP4Q9P0V3 963 aa8.04□□□□□ -1.12
ITGB1-217ENST00000494395 NCOA6Q14686 2063 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-217ENST00000494395 USP9XQ93008 2570 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-217ENST00000494395 DOPEY2Q9Y3R5 2298 aa8.03□□□□□ -1.12
ITGB1-217ENST00000494395 WIPF3A6NGB9 483 aa8.03□□□□□ -1.12
ITGB1-217ENST00000494395 CAPN14A8MX76 684 aa8.03□□□□□ -1.12
ITGB1-217ENST00000494395 NPIPA5E9PKD4 350 aa8.03□□□□□ -1.12
ITGB1-217ENST00000494395 SLCO1B7G3V0H7 640 aa8.03□□□□□ -1.12
ITGB1-217ENST00000494395 HS6ST1O60243 411 aa8.03□□□□□ -1.12
ITGB1-217ENST00000494395 SCN2BO60939 215 aa8.03□□□□□ -1.12
ITGB1-217ENST00000494395 UGT2B11O75310 529 aa8.03□□□□□ -1.12
ITGB1-217ENST00000494395 UNC5CO95185 931 aa8.03□□□□□ -1.12
ITGB1-217ENST00000494395 IGHG3P01860 377 aa8.03□□□□□ -1.12
ITGB1-217ENST00000494395 GSTP1P09211 210 aaKnown RBP8.03□□□□□ -1.12
ITGB1-217ENST00000494395 HOXB4P17483 251 aaPredicted RBP8.03□□□□□ -1.12
ITGB1-217ENST00000494395 ATF4P18848 351 aaPredicted RBP8.03□□□□□ -1.12
ITGB1-217ENST00000494395 EFNA1P20827 205 aaPredicted RBP8.03□□□□□ -1.12
ITGB1-217ENST00000494395 EPHA3P29320 983 aa8.03□□□□□ -1.12
ITGB1-217ENST00000494395 CASP3P42574 277 aa8.03□□□□□ -1.12
ITGB1-217ENST00000494395 MANFP55145 182 aaKnown RBP8.03□□□□□ -1.12
ITGB1-217ENST00000494395 WNT3P56703 355 aa8.03□□□□□ -1.12
ITGB1-217ENST00000494395 PPP2R2AP63151 447 aa8.03□□□□□ -1.12
ITGB1-217ENST00000494395 PHC1P78364 1004 aa8.03□□□□□ -1.12
ITGB1-217ENST00000494395 HSF1Q00613 529 aa8.03□□□□□ -1.12
ITGB1-217ENST00000494395 PLCXD2Q0VAA5 305 aa8.03□□□□□ -1.12
ITGB1-217ENST00000494395 GFRALQ6UXV0 394 aa8.03□□□□□ -1.12
ITGB1-217ENST00000494395 FAM47EQ6ZV65 393 aa8.03□□□□□ -1.12
ITGB1-217ENST00000494395 SLC44A2Q8IWA5 706 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms