RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 SNX24Q9Y343 169 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 ZNF780BQ9Y6R6 833 aa15.91■□□□□ 0.14
NUP50-218ENST00000493456 CCDC188H7C350 402 aa15.9■□□□□ 0.14
NUP50-218ENST00000493456 KLF4O43474 513 aa15.9■□□□□ 0.14
NUP50-218ENST00000493456 TP53P04637 393 aaPredicted RBP15.9■□□□□ 0.14
NUP50-218ENST00000493456 THBDP07204 575 aa15.9■□□□□ 0.14
NUP50-218ENST00000493456 PCSK2P16519 638 aa15.9■□□□□ 0.14
NUP50-218ENST00000493456 CCNG1P51959 295 aa15.9■□□□□ 0.14
NUP50-218ENST00000493456 MRPS22P82650 360 aaKnown RBP15.9■□□□□ 0.14
NUP50-218ENST00000493456 IFT88Q13099 833 aa15.9■□□□□ 0.14
NUP50-218ENST00000493456 ACAP2Q15057 778 aa15.9■□□□□ 0.14
NUP50-218ENST00000493456 PON3Q15166 354 aa15.9■□□□□ 0.14
NUP50-218ENST00000493456 TTC19Q6DKK2 380 aaPredicted RBP15.9■□□□□ 0.14
NUP50-218ENST00000493456 LARP4Q71RC2 724 aaKnown RBP eCLIP15.9■□□□□ 0.14
NUP50-218ENST00000493456 FAM214BQ7L5A3 538 aa15.9■□□□□ 0.14
NUP50-218ENST00000493456 COMMD6Q7Z4G1 85 aa15.9■□□□□ 0.14
NUP50-218ENST00000493456 PPM1NQ8N819 430 aa15.9■□□□□ 0.14
NUP50-218ENST00000493456 FNDC9Q8TBE3 224 aa15.9■□□□□ 0.14
NUP50-218ENST00000493456 ZNF675Q8TD23 568 aa15.9■□□□□ 0.14
NUP50-218ENST00000493456 KCTD4Q8WVF5 259 aa15.9■□□□□ 0.14
NUP50-218ENST00000493456 TMEM158Q8WZ71 300 aa15.9■□□□□ 0.14
NUP50-218ENST00000493456 ATP6V1E2Q96A05 226 aa15.9■□□□□ 0.14
NUP50-218ENST00000493456 FAIM2Q9BWQ8 316 aa15.9■□□□□ 0.14
NUP50-218ENST00000493456 NOL11Q9H8H0 719 aaKnown RBP15.9■□□□□ 0.14
NUP50-218ENST00000493456 PPP4R1LQ9P1A2 415 aa15.9■□□□□ 0.14
NUP50-218ENST00000493456 ROS1P08922 2347 aa15.9■□□□□ 0.14
NUP50-218ENST00000493456 HEATR5AQ86XA9 2040 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 USF3Q68DE3 2245 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 B4DXG7 233 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 OR7A17O14581 309 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 SEC14L5O43304 696 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 TLX2O43763 284 aaPredicted RBP15.89■□□□□ 0.13
NUP50-218ENST00000493456 CT45A8P0DMV1 189 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 CT45A9P0DMV2 189 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 PNLIPRP2P54317 469 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 CLDN15P56746 228 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 MRPS35P82673 323 aaKnown RBP15.89■□□□□ 0.13
NUP50-218ENST00000493456 CALCOCO2Q13137 446 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 NAB1Q13506 487 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 VEZF1Q14119 521 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 LTB4RQ15722 352 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 CLEC12BQ2HXU8 276 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 CT45A2Q5DJT8 189 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 ANKRD34AQ69YU3 496 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 KLC3Q6P597 504 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 FADS6Q8N9I5 356 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 OR52B6Q8NGF0 335 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 GFM2Q969S9 779 aaKnown RBP15.89■□□□□ 0.13
NUP50-218ENST00000493456 ZNF681Q96N22 645 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 CDK15Q96Q40 435 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 TMEM204Q9BSN7 226 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 NTMT1Q9BV86 223 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 STMN4Q9H169 189 aaPredicted RBP15.89■□□□□ 0.13
NUP50-218ENST00000493456 FANCFQ9NPI8 374 aa15.89■□□□□ 0.13
NUP50-218ENST00000493456 UQCRHLA0A096LP55 91 aa15.88■□□□□ 0.13
NUP50-218ENST00000493456 RNF223E7ERA6 249 aa15.88■□□□□ 0.13
NUP50-218ENST00000493456 SIX3O95343 332 aaPredicted RBP15.88■□□□□ 0.13
NUP50-218ENST00000493456 EVI2BP34910 448 aa15.88■□□□□ 0.13
NUP50-218ENST00000493456 SUCLG1P53597 346 aaKnown RBP15.88■□□□□ 0.13
NUP50-218ENST00000493456 RPS3AP61247 264 aaKnown RBP15.88■□□□□ 0.13
NUP50-218ENST00000493456 RPS4XP62701 263 aaKnown RBP15.88■□□□□ 0.13
NUP50-218ENST00000493456 IRF9Q00978 393 aa15.88■□□□□ 0.13
NUP50-218ENST00000493456 DUSP2Q05923 314 aa15.88■□□□□ 0.13
NUP50-218ENST00000493456 EXOC3L2Q2M3D2 409 aa15.88■□□□□ 0.13
NUP50-218ENST00000493456 ERCC6LQ2NKX8 1250 aa15.88■□□□□ 0.13
NUP50-218ENST00000493456 ZNF628Q5EBL2 1059 aa15.88■□□□□ 0.13
NUP50-218ENST00000493456 CREG2Q8IUH2 290 aa15.88■□□□□ 0.13
NUP50-218ENST00000493456 METTL25Q8N6Q8 603 aa15.88■□□□□ 0.13
NUP50-218ENST00000493456 OR6K3Q8NGY3 331 aa15.88■□□□□ 0.13
NUP50-218ENST00000493456 TM4SF18Q96CE8 201 aa15.88■□□□□ 0.13
NUP50-218ENST00000493456 CNRIP1Q96F85 164 aaPredicted RBP15.88■□□□□ 0.13
NUP50-218ENST00000493456 VSTM2LQ96N03 204 aa15.88■□□□□ 0.13
NUP50-218ENST00000493456 CPSF2Q9P2I0 782 aaKnown RBP15.88■□□□□ 0.13
NUP50-218ENST00000493456 SLC12A4Q9UP95 1085 aa15.88■□□□□ 0.13
NUP50-218ENST00000493456 EMC9Q9Y3B6 208 aa15.88■□□□□ 0.13
NUP50-218ENST00000493456 ZNF337Q9Y3M9 751 aa15.88■□□□□ 0.13
NUP50-218ENST00000493456 H0YC42 278 aa15.87■□□□□ 0.13
NUP50-218ENST00000493456 HK1P19367 917 aa15.87■□□□□ 0.13
NUP50-218ENST00000493456 STX2P32856 288 aa15.87■□□□□ 0.13
NUP50-218ENST00000493456 TPD52P55327 224 aaPredicted RBP15.87■□□□□ 0.13
NUP50-218ENST00000493456 CORO7P57737 925 aa15.87■□□□□ 0.13
NUP50-218ENST00000493456 TRA2BP62995 288 aaKnown RBP15.87■□□□□ 0.13
NUP50-218ENST00000493456 GALNT1Q10472 559 aaPredicted RBP15.87■□□□□ 0.13
NUP50-218ENST00000493456 GGTA1PQ4G0N0 100 aa15.87■□□□□ 0.13
NUP50-218ENST00000493456 HIPK1Q86Z02 1210 aa15.87■□□□□ 0.13
NUP50-218ENST00000493456 MAPK1IP1LQ8NDC0 245 aa15.87■□□□□ 0.13
NUP50-218ENST00000493456 OR2M3Q8NG83 312 aa15.87■□□□□ 0.13
NUP50-218ENST00000493456 TRMT61AQ96FX7 289 aaKnown RBP15.87■□□□□ 0.13
NUP50-218ENST00000493456 PLPPR2Q96GM1 343 aa15.87■□□□□ 0.13
NUP50-218ENST00000493456 REG4Q9BYZ8 158 aa15.87■□□□□ 0.13
NUP50-218ENST00000493456 OR10A4Q9H209 315 aa15.87■□□□□ 0.13
NUP50-218ENST00000493456 DSN1Q9H410 356 aa15.87■□□□□ 0.13
NUP50-218ENST00000493456 ELOVL6Q9H5J4 265 aa15.87■□□□□ 0.13
NUP50-218ENST00000493456 PTGES2Q9H7Z7 377 aa15.87■□□□□ 0.13
NUP50-218ENST00000493456 PLSCR4Q9NRQ2 329 aa15.87■□□□□ 0.13
NUP50-218ENST00000493456 WHRNQ9P202 907 aa15.87■□□□□ 0.13
NUP50-218ENST00000493456 UTS2RQ9UKP6 389 aa15.87■□□□□ 0.13
NUP50-218ENST00000493456 OR2M5A3KFT3 312 aa15.86■□□□□ 0.13
NUP50-218ENST00000493456 H3BML4 177 aa15.86■□□□□ 0.13
NUP50-218ENST00000493456 ZSCAN12O43309 604 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms