RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 ZNF354AO60765 605 aaPredicted RBP15.87■□□□□ 0.13
LIME1-208ENST00000493265 REM1O75628 298 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 NKX2-2O95096 273 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 NUDT7P0C024 238 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 SLC6A2P23975 617 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 MAN2A2P49641 1150 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 ANXA11P50995 505 aaKnown RBP15.87■□□□□ 0.13
LIME1-208ENST00000493265 SSR4P51571 173 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 SLC7A2P52569 658 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 MVDP53602 400 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 NRG3P56975 720 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 DSTNP60981 165 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 POU6F2P78424 691 aaPredicted RBP15.87■□□□□ 0.13
LIME1-208ENST00000493265 PLCXD2Q0VAA5 305 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 CYP51A1Q16850 503 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 PIGGQ5H8A4 983 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 CRB2Q5IJ48 1285 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 CCNJQ5T5M9 372 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 FIGNL1Q6PIW4 674 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 HACD2Q6Y1H2 254 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 CCDC121Q6ZUS5 278 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 OLIG3Q7RTU3 272 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 C16orf62Q7Z3J2 963 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 BEST3Q8N1M1 668 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 C10orf111Q8N326 155 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 TMEM156Q8N614 296 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 RBM15BQ8NDT2 890 aaKnown RBP15.87■□□□□ 0.13
LIME1-208ENST00000493265 OR5M3Q8NGP4 307 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 SLC22A8Q8TCC7 542 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 TMBIM1Q969X1 311 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 TP53INP1Q96A56 240 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 RASL10BQ96S79 203 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 SH3GL1Q99961 368 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 HOPXQ9BPY8 73 aaPredicted RBP15.87■□□□□ 0.13
LIME1-208ENST00000493265 ECSITQ9BQ95 431 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 PIGUQ9H490 435 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 PLA2G3Q9NZ20 509 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 ADA2Q9NZK5 511 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 CBLCQ9ULV8 474 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 CORO2BQ9UQ03 480 aa15.87■□□□□ 0.13
LIME1-208ENST00000493265 YARS2Q9Y2Z4 477 aaKnown RBP15.87■□□□□ 0.13
LIME1-208ENST00000493265 DUXAA6NLW8 204 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 A8MVJ9 347 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 HMGN4O00479 90 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 NADKO95544 446 aaPredicted RBP15.86■□□□□ 0.13
LIME1-208ENST00000493265 ALPPP05187 535 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 KRT20P35900 424 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 SOX3P41225 446 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 SOX8P57073 446 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 BNIP1Q12981 228 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 ATAD3BQ5T9A4 648 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 C16orf89Q6UX73 402 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 ISLR2Q6UXK2 745 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 IL20RBQ6UXL0 311 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 IFNEQ86WN2 208 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 DEFB107AQ8IZN7 70 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 LGI4Q8N135 537 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 OR8J3Q8NGG0 315 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 OR10A6Q8NH74 314 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 MIPOL1Q8TD10 442 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 ASB15Q8WXK1 588 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 TMEM125Q96AQ2 219 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 EFHD2Q96C19 240 aaPredicted RBP15.86■□□□□ 0.13
LIME1-208ENST00000493265 OMA1Q96E52 524 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 HSPBAP1Q96EW2 488 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 STACQ99469 402 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 GPATCH1Q9BRR8 931 aaKnown RBP15.86■□□□□ 0.13
LIME1-208ENST00000493265 ZNF552Q9H707 407 aaPredicted RBP15.86■□□□□ 0.13
LIME1-208ENST00000493265 ZBTB20Q9HC78 741 aaPredicted RBP15.86■□□□□ 0.13
LIME1-208ENST00000493265 DUSP22Q9NRW4 184 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 EXD2Q9NVH0 621 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 CMTM6Q9NX76 183 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 ABI3Q9P2A4 366 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 PACSIN3Q9UKS6 424 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 PCDHGB3Q9Y5G1 929 aa15.86■□□□□ 0.13
LIME1-208ENST00000493265 C15orf38-AP3S2A0A0A6YYH1 394 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 TTC36A6NLP5 189 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 ACOX3O15254 700 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 SUV39H1O43463 412 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 OR6B1O95007 311 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 NR2F1P10589 423 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 GPX2P18283 190 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 ABCD3P28288 659 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 IL12BP29460 328 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 TRHRP34981 398 aaPredicted RBP15.85■□□□□ 0.13
LIME1-208ENST00000493265 MAP3K8P41279 467 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 MRPS22P82650 360 aaKnown RBP15.85■□□□□ 0.13
LIME1-208ENST00000493265 OC90Q02509 493 aaPredicted RBP15.85■□□□□ 0.13
LIME1-208ENST00000493265 FADDQ13158 208 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 SYPL1Q16563 259 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 DECR1Q16698 335 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 GPAT3Q53EU6 434 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 EXOSC6Q5RKV6 272 aaKnown RBP15.85■□□□□ 0.13
LIME1-208ENST00000493265 DCST2Q5T1A1 773 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 GCNT6Q5T4J0 391 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 ARPINQ7Z6K5 226 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 SLC34A3Q8N130 599 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 BCORP1Q8N888 145 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 FAM13CQ8NE31 585 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 C17orf47Q8NEP4 570 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms