RNA–Protein interactions for RNA: ENST00000492980.1

CCDC88B-208, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 5

Gene CCDC88B, Length 2,118 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-208ENST00000492980 IFT52Q9Y366 437 aa19.7■□□□□ 0.74
CCDC88B-208ENST00000492980 PLOD3O60568 738 aa19.7■□□□□ 0.74
CCDC88B-208ENST00000492980 CCNYL3P0C7X3 344 aa19.7■□□□□ 0.74
CCDC88B-208ENST00000492980 RGS8P57771 180 aaPredicted RBP19.7■□□□□ 0.74
CCDC88B-208ENST00000492980 HOXC5Q00444 222 aa19.7■□□□□ 0.74
CCDC88B-208ENST00000492980 PRICKLE4Q2TBC4 344 aa19.7■□□□□ 0.74
CCDC88B-208ENST00000492980 ANKDD1AQ495B1 522 aa19.7■□□□□ 0.74
CCDC88B-208ENST00000492980 PLAG1Q6DJT9 500 aa19.7■□□□□ 0.74
CCDC88B-208ENST00000492980 ZNF836Q6ZNA1 936 aa19.7■□□□□ 0.74
CCDC88B-208ENST00000492980 SLC15A4Q8N697 577 aa19.7■□□□□ 0.74
CCDC88B-208ENST00000492980 C19orf47Q8N9M1 422 aaKnown RBP19.7■□□□□ 0.74
CCDC88B-208ENST00000492980 OR8J1Q8NGP2 316 aa19.7■□□□□ 0.74
CCDC88B-208ENST00000492980 ALOXE3Q9BYJ1 711 aa19.7■□□□□ 0.74
CCDC88B-208ENST00000492980 MAT2BQ9NZL9 334 aa19.7■□□□□ 0.74
CCDC88B-208ENST00000492980 TMEM131Q92545 1883 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 EFCAB9A8MZ26 197 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 RDH16O75452 317 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 GSTM3P21266 225 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 CDH3P22223 829 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 RAB38P57729 211 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 MGAT2Q10469 447 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 ST3GAL3Q11203 375 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 CCNJQ5T5M9 372 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 ARHGAP22Q7Z5H3 698 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 MEX3DQ86XN8 651 aaKnown RBP19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 KIF18BQ86Y91 864 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 PEX5LQ8IYB4 626 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 TCEANCQ8N8B7 351 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 ZNF350Q9GZX5 532 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 ANKRD19PQ9H560 264 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 NTNG1Q9Y2I2 539 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 CENPVL1A0A0U1RR11 272 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 NTN1O95631 604 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 CSF2P04141 144 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 GADD45AP24522 165 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 TGFBR1P36897 503 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 GINS1Q14691 196 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 ZNF367Q7RTV3 350 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 PRICKLE2Q7Z3G6 844 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 AVL9Q8NBF6 648 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 GNPDA2Q8TDQ7 276 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 ANKRD9Q96BM1 317 aaPredicted RBP19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 HSPBAP1Q96EW2 488 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 TVP23BQ9NYZ1 205 aa19.69■□□□□ 0.74
CCDC88B-208ENST00000492980 FAM170BA6NMN3 283 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 AP3D1O14617 1153 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 CNOT3O75175 753 aaKnown RBP19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 UBXN7O94888 489 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 ALOX5P09917 674 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 CT62P0C5K7 136 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 CD27P26842 260 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 OPRL1P41146 370 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 GIPRP48546 466 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 C21orf59P57076 290 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 CDK5Q00535 292 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 DUSP8Q13202 625 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 FZD5Q13467 585 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 OCLNQ16625 522 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 DGUOKQ16854 277 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 MFSD4BQ5TF39 518 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 PLEKHM3Q6ZWE6 761 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 CDRT4Q8N9R6 151 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 OR9A4Q8NGU2 314 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 MCHR1Q99705 422 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 POLDIP3Q9BY77 421 aaKnown RBP19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 ANKHQ9HCJ1 492 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 ZNF232Q9UNY5 417 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 CLCA2Q9UQC9 943 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 PMF1-BGLAPU3KQ54 211 aa19.68■□□□□ 0.74
CCDC88B-208ENST00000492980 A0A1W2PR77 199 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 AGAP5A6NIR3 686 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 SLC9B1P1A6NJY1 282 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 AIREO43918 545 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 PRKYO43930 277 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 NADKO95544 446 aaPredicted RBP19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 THY1P04216 161 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 IFI6P09912 130 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 NME1P15531 152 aaKnown RBP19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 IFNGR2P38484 337 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 PCYT1AP49585 367 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 EEF1A1P68104 462 aaKnown RBP19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 EXOSC7Q15024 291 aaKnown RBP19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 LARS2Q15031 903 aaKnown RBP19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 ARMCX4Q5H9R4 360 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 DCST2Q5T1A1 773 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 ACSM5Q6NUN0 579 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 CHRDL2Q6WN34 429 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 ZNF730Q6ZMV8 503 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 MCATQ8IVS2 390 aaKnown RBP19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 ARL14Q8N4G2 192 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 PLA2G12AQ9BZM1 189 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 CACYBPQ9HB71 228 aaKnown RBP19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 DUSP22Q9NRW4 184 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 TBC1D23Q9NUY8 699 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 SATB2Q9UPW6 733 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 CORINQ9Y5Q5 1042 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 METTL12A8MUP2 240 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 THBS1P07996 1170 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 CD38P28907 300 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms